Kitasatospora sp. CMC57: KCMC57_up21510
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Entry
KCMC57_up21510 CDS
T11196
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kic Kitasatospora sp. CMC57
Pathway
kic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KCMC57_up21510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kic03019
]
KCMC57_up21510
03016 Transfer RNA biogenesis [BR:
kic03016
]
KCMC57_up21510
Enzymes [BR:
kic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KCMC57_up21510
Messenger RNA biogenesis [BR:
kic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KCMC57_up21510
Transfer RNA biogenesis [BR:
kic03016
]
Prokaryotic type
tRNA degradation factors
KCMC57_up21510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BFV57047
LinkDB
All DBs
Position
complement(2410668..2412884)
Genome browser
AA seq
738 aa
AA seq
DB search
MEENVFYAEAVIDNGSFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATSASKQPKEH
FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFVKGLRNEVQV
VCTIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIKGQWVAFPTHTELEDA
VFDMVVAGRALADGDVAIMMVEAEATTKTIKLVADGAEAPTEEVVAAGLEAAKPFIKVLC
AAQAKLAAQAAKPTGEFPVFLDYQDDVLAALSDAVKGDLAKALTIAGKQERNAEIDRIKV
VAADKLLPKFEGREKEISAAYNALTKKIVRERVITDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPETRRRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAILPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNAGVP
LKAAVAGIAMGLISQEIDGETHYVTLTDILGAEDAFGDMDFKVAGTRNFITALQLDTKLN
GIPASVLAAALKQAKDARLHILDVMNEAIDTPDEMSPNAPRIITIKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAVDGPSAEAARTTINQIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLAVGSKVQVEIAEIDPRGKLSL
IPVVEGEEGVEDAAPASE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggaagagaacgtgttctacgccgaggccgtcatcgacaacggcagcttcggcacccgt
accatccgtttcgagaccggtcggctggcccgtcaggccgccggctcggccgtggcctac
ctggacgacgacaccatggtgctgtcggccaccagcgcctccaagcagccgaaggagcac
ttcgacttcttcccgctgacggtcgacgtcgaggagcggatgtacgccgcgggccggatc
cccggttcgttcttccgtcgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcgtcaagggcctgcgcaacgaggtgcaggtc
gtctgcacgatcatggcgctcaaccccgaccacctgtacgacgtggtggccatcaacgcc
gcctcggcgtccacccagctggcgggcctgcccttctccggcccgatcggtggcgtccgc
gtcgcgctgatcaagggtcagtgggtggccttcccgacccacaccgagcttgaggacgcc
gtcttcgacatggtcgtggccggccgcgcgctggccgacggtgacgtcgcgatcatgatg
gtggaggccgaggccaccaccaagacgatcaagctggtcgccgacggcgccgaggccccg
accgaggaggtcgtggccgccggtctcgaggccgcgaagccgttcatcaaggtgctgtgc
gccgcgcaggcgaagctggccgcccaggccgccaagcccaccggcgagttcccggtcttc
ctggactaccaggacgacgtgctggccgccctctcggacgccgtcaagggcgacctggcc
aaggcgctcaccatcgccggcaagcaggagcgcaacgccgagatcgaccgcatcaaggtc
gtcgcggccgacaagctgctcccgaagttcgagggccgcgagaaggagatcagcgccgcg
tacaacgcgctgaccaagaagatcgtccgcgagcgcgtcatcaccgacaaggtccgcatc
gacggccgtggcgtcacggacatccgtacgctggccgccgaggtcgaggcgatcccgcgg
gtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccggatggagcagcagctcgacacgctctccccggagacgcgtcgccgctac
atgcacaactacaacttcccgccgtactcggtcggcgagaccggccgcgtcggttcgccg
aagcgccgcgagatcggccacggcgcgctggccgagcgggcgatcctgcccgtgctgccg
acccgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgagctccaacggc
tccacctcgatgggctcggtctgcgcctcgaccatgtcgctgctgaacgccggtgtgccg
ctcaaggccgccgtcgccggtatcgcgatgggcctgatctcgcaggagatcgacggcgag
acgcactacgtcacgctgaccgacatcctcggtgccgaggacgcgttcggtgacatggac
ttcaaggtcgccggtacccgcaacttcatcaccgcgctgcagctcgacaccaagctgaac
ggcatcccggcctcggtcctggccgccgccctcaagcaggccaaggacgcgcgtctgcac
atcctggacgtgatgaacgaggcgatcgacactccggacgagatgtcgccgaacgccccg
cgcatcatcaccatcaagatcccggtggacaagatcggtgaggtcatcggcccgaagggc
aagatgatcaaccagatccaggaggacaccggcgcggacatcaccatcgaggacgacggc
accatctacatcggtgcggtcgacggtccttcggcggaggctgcccgtacgacgatcaac
cagatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcaccgtggtgaag
accacgacgttcggcgcgttcgtgtcgctcatgccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctggcc
gtcggctccaaggtccaggtcgagatcgccgagatcgacccgcgcggcaagctctcgctg
atccccgtcgtcgagggcgaggagggcgtcgaggacgccgctccggcctccgagtga
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