Kitasatospora sp. CMC57: KCMC57_up44530
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Entry
KCMC57_up44530 CDS
T11196
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
kic Kitasatospora sp. CMC57
Pathway
kic03030
DNA replication
kic03430
Mismatch repair
kic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KCMC57_up44530 (holA)
03430 Mismatch repair
KCMC57_up44530 (holA)
03440 Homologous recombination
KCMC57_up44530 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kic03032
]
KCMC57_up44530 (holA)
03400 DNA repair and recombination proteins [BR:
kic03400
]
KCMC57_up44530 (holA)
Enzymes [BR:
kic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KCMC57_up44530 (holA)
DNA replication proteins [BR:
kic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KCMC57_up44530 (holA)
DNA repair and recombination proteins [BR:
kic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KCMC57_up44530 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BFV59349
LinkDB
All DBs
Position
4989381..4990376
Genome browser
AA seq
331 aa
AA seq
DB search
MARKSAPDVLLAPLTLVVGQEELLLDRVVAAVVAAARAADPDTDVRDLAPGALQPGSLAE
LTTPSLFAERKVIVVRAAQDLSADSVKELRAYLDTPAEEVMVVLVHAGGAKGKGLLDAGR
KLGAREVACPKLTKAGEKLAFIKGEFRTLGRSATPEACQALLDALGSDLRELASACSQLT
ADVEGAIDETVVARYYGGRAEATGFEVADLAVTGRTAEALERLRWALAVGQPPTGITYAL
ASGVRSIGRLASAGRNMRPGDLARELGMPPWKIDRVRQQMRGWTGDGVATALTAIARADA
DVKGGSGDPAYALERAVVAVARASRAGARPH
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagagtgcacccgacgtcctgctcgccccgctgaccctggtggtcggccag
gaggagctgctgctcgaccgcgtggtcgccgccgtggtcgccgccgcccgggcggccgat
ccggacaccgacgtacgcgacctcgcccccggtgcgctccagcccggcagcctggccgaa
ttgaccacgccctcgctgttcgccgagcgcaaggtgatcgtggtccgggccgcacaggac
ctctcggcggattcggtcaaggagctcagggcctacctcgacacgcccgccgaggaggtc
atggtggtgctggtccacgccggcggcgccaagggcaagggcctgctggacgcggggcgc
aagctcggtgcccgcgaggtggcctgccccaagctcaccaaggcgggcgagaaactggcg
ttcatcaagggcgagttccgtacgctgggccggtccgccacccccgaggcctgccaggcg
ctgctcgacgcgctcggcagcgacctccgcgagctggcctcggcctgcagccagttgacc
gccgacgtcgagggagcgatcgacgagaccgtggtcgcccgctactacggcggccgcgcc
gaggccaccggcttcgaggtggccgacctggccgtcaccggccggacggccgaggcgctg
gagcggctgcggtgggcgctggcggtcggtcagccgcccaccggcatcacctacgcgctc
gcctccggcgtccgcagcatcggccgactggccagcgccggccggaacatgcggcccggc
gacctggcccgggagctgggcatgccgccgtggaagatcgaccgggtcaggcagcagatg
cgcggctggacgggcgacggggtcgccaccgccctcaccgcgatcgcccgggccgatgcc
gacgtcaagggcggttccggcgacccggcctacgccctggagcgtgccgtggtcgcggtg
gccagggcctcccgcgcgggcgcccgcccgcactga
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