Kitasatospora sp. CMC57: KCMC57_up50620
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Entry
KCMC57_up50620 CDS
T11196
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
kic Kitasatospora sp. CMC57
Pathway
kic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KCMC57_up50620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kic03000
]
KCMC57_up50620
03400 DNA repair and recombination proteins [BR:
kic03400
]
KCMC57_up50620
Enzymes [BR:
kic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KCMC57_up50620
Transcription factors [BR:
kic03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KCMC57_up50620
DNA repair and recombination proteins [BR:
kic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KCMC57_up50620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF7437
Motif
Other DBs
NCBI-ProteinID:
BFV59958
LinkDB
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Position
5685254..5686801
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AA seq
515 aa
AA seq
DB search
MTQTPTDDDTRYRAVDSRDARFDGVFFTAVSSTGIYCRPSCPAVTPKRVNCTFYPTAAAA
QGAGYRACRRCRPDSVPGSPEWNHRADLVGRAMRLIGDGVVDREGVAGLAERLGYSSRQV
QRQLTAELGAGPIALARAQRAQTARLLLQTTGLPVTEIAFAAGFSSVRQFNDTVREVYDR
TPSGLRAERNGHRSGTVTPGSIGLRLAYRGTLDSDHLLDFLALRAVPGVEEVVPGAAPGV
RTYRRTLALPYGHAIAEVDGLGAGGPANRGWLDCRLQLTDLRDLTTAVHRLRALFDLDAD
PDAVDGQLGADPVLGELVRGRPGVRSPGHVDPHELAVRAVLGQQITVAAARTLAARLSER
YGVALPEASGGLRLLFPTAGALAEADSADLAMPDSRRRALRGLCAALADGTLRLDGGADR
EAAAVELLALPGIGPWTVGYLRMRALGDPDVFLPSDVGVRHGLQRLGHPGDPRAAVLAGA
SWAPWRSYAVHRLWASLAPAPPALRTDRVSEGVRA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagactccgaccgacgacgacaccaggtaccgggcggtggacagccgcgatgcc
cgcttcgacggcgtgttcttcacggccgtcagcagcaccggcatctactgccgcccgagt
tgccccgccgtgacccccaagcgggtcaactgcaccttctacccgacggccgccgccgct
cagggcgcgggctaccgggcctgccgccggtgccgccccgactcggtgcccggctcgccg
gagtggaaccaccgggccgacctggtgggccgggcgatgcgtctgatcggcgacggcgtg
gtggaccgcgagggcgtggccggcctggccgagcggctcgggtacagctctcgccaggtg
cagcggcagctgaccgcggagctcggcgccggaccgatcgccctggccagggcgcagcgc
gcgcagaccgcccggctgctgctgcagaccaccggactcccggtcaccgagatcgcgttc
gcggccggattctcctcggtgcggcagttcaacgacaccgtccgcgaggtctacgaccgc
accccgagcggcctgcgggccgaacggaacggccaccgcagcggcaccgtgactcccggg
tcgatcggcctccggctggcgtaccggggcacgctggacagcgaccacctgctggacttc
ctggcgctgcgcgccgtacccggcgtggaggaggtggtgcccggcgcggcgcccggcgtg
cgcacctaccggcgcaccctggcgctgccgtacggccacgccatcgccgaggtggacggc
ctgggcgccgggggcccggcgaaccgtggctggctggactgccggctacagctcaccgac
ctgcgcgacctcaccaccgctgtgcaccggctccgcgcgctcttcgacctggacgccgac
cccgacgcggtggacggccagctcggcgccgacccggtgctcggcgagctggtccggggc
cgccccggcgtgcgctccccggggcacgtggacccgcacgagctcgcggtgcgcgccgtc
ctcggtcagcagatcaccgtggcagccgcccggacgctggccgcgcggctgagtgagcgg
tacggcgtcgcgctgcccgaggccagcggcggcctgcgactgctgttccccacggcagga
gcactcgccgaggccgactccgccgacctggcgatgccggactcccggcgccgtgccctg
cgcgggctctgcgcggccctggccgacggcaccctccggctggacggcggagccgaccgc
gaggccgccgccgtcgagctgctcgccctgccgggcatcgggccgtggacggtcggctac
ctgcggatgcgcgcgctcggagacccggacgtcttcctgccgagcgacgtcggcgtcagg
cacggcctgcaacggctcggccaccccggcgaccccagggcggcggtcctggcgggagca
tcctgggcgccctggcgctcgtacgcggtacaccgcctgtgggcctcactggctccagca
cctccagcactacgaactgaccgggtatcagaaggagttcgggcatga
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