Kitasatospora sp. CMC57: KCMC57_up53680
Help
Entry
KCMC57_up53680 CDS
T11196
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
kic Kitasatospora sp. CMC57
Pathway
kic00040
Pentose and glucuronate interconversions
kic01100
Metabolic pathways
kic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KCMC57_up53680
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KCMC57_up53680
Enzymes [BR:
kic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KCMC57_up53680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
ATPD_C_metazoa
Motif
Other DBs
NCBI-ProteinID:
BFV60264
LinkDB
All DBs
Position
complement(5994744..5996069)
Genome browser
AA seq
441 aa
AA seq
DB search
MRVPRRTALLACTAALLGATCVTVTCATVTPAAAADVAHTVLAAKDGWGSATTGTTGGSK
ADAAHTVTVTTRAQLVAALGGNNSSNASNATAKIIQVSGTIDLNVNDSNAHLSCANYQTG
GYTLAKYLAAYDPAVWGRSKVPSGALEDARAASQKAQAARVQINVGANTTIVGINGGKLL
GGGLVVKNVDNVIVRNLTFEDAADCFPQWDPTDGSTGNWNSMYDNLVAYNATHVWVDHNT
FTDGANVDSKQPSYFGRPYQVHDGELDVVKGADYVTASWNVFKDHDKTILVGNSDSSTVD
TGKLRVTFHHNLWQNTVERAPRVRFGQVDVYNNYFVPTAGQYEYSIGVGKNSKIVAQYNY
FKLPSGTTAGQVLSKLNGTALTADNNSVNGTTTDLISAYNAAHSSSTLGASAGWTPSLRL
TVQATSAVPAAVTASAGAGRI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtaccccgccgcaccgccctgctcgcctgcaccgccgccctgctgggcgccacc
tgcgtgaccgtcacctgtgccaccgtcaccccggccgccgcggccgatgtcgcgcacacc
gtcctggccgcgaaggacggttggggctcggccaccaccggcaccaccggtggcagcaag
gccgacgccgcgcacaccgtcacggtcaccacccgggcccagctggtcgccgccctcggg
ggcaacaacagctccaacgcctcgaacgccaccgcgaagatcatccaggtctccggcacc
atcgacctgaacgtcaacgactccaacgcccatctgtcctgcgcgaactaccagaccggc
ggctacaccctggccaagtacctcgccgcgtacgacccggcggtctggggccggagcaag
gtcccgtccggcgccctggaggacgcccgggccgcctcccagaaggcgcaggccgcccgg
gtgcagatcaacgtgggcgccaacaccaccatcgtcggaatcaacggcggaaagctgctc
ggcggcggcctggtggtgaagaacgtggacaacgtgatcgtccgcaacctcaccttcgag
gacgcggccgactgcttcccgcagtgggacccgaccgacggctccaccggcaactggaac
tcgatgtacgacaatctggtggcctacaatgccacccacgtgtgggtcgaccacaacacc
ttcaccgacggcgccaacgtggactccaagcaaccgagttacttcggccgcccgtaccag
gtgcacgacggcgagttggacgtggtcaagggcgccgactacgtcaccgcctcctggaac
gtcttcaaggaccacgacaagaccatcctggtcggcaacagcgacagctccacggtggac
accggcaagctccgggtcaccttccaccacaatctctggcagaacaccgtggagcgcgcg
ccccgggtgcgcttcggccaggtggacgtctacaacaactacttcgtgccgaccgccgga
cagtacgagtacagcatcggcgtcggtaagaactcgaagatcgtggcccagtacaactac
ttcaagctgccgtccgggaccaccgccggccaggtgctgagcaagctcaacggcaccgcg
ctgacggcggacaacaactcggtgaacggcaccaccaccgacctgatctccgcctacaac
gccgcccactccagcagcacgctgggcgcttcggccggctggacgccctcgctccggctc
accgtgcaggccacctccgccgtcccggccgccgtcaccgcctcggccggcgcgggccgg
atctga
DBGET
integrated database retrieval system
