Kluyvera intermedia: NCTC12125_00465
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Entry
NCTC12125_00465 CDS
T06042
Name
(GenBank) type I restriction enzyme EcoKI subunit R
KO
K19789
DNA repair protein RadD
Organism
kie
Kluyvera intermedia
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kie03400
]
NCTC12125_00465
DNA repair and recombination proteins [BR:
kie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NCTC12125_00465
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
SLFN-g3_helicase
AAA_22
zf-tcix
AAA_16
DZR
MgtE_N
DUF7577
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
VDZ82417
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Position
1:complement(434732..436489)
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AA seq
585 aa
AA seq
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MTFTLRPYQQEAVDATLTYFRRQTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYLALGLEADIYAAGLKRKESHGKVVFGSVQSVARNLDHFQGEFSLLIVDECH
RISDDDDSQYQQILIHLRKVNPHIRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQANSNGLFSEADLNRELKQQQRITPH
IISQIIEFAQDRKGVMIFASTVEHAREITGLLPANDAALITGETPGPQRDELIDAFKHQQ
FRYLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYTPEVGSPKGKSDNVPVQVFCPGCGFANTFWGKTTADGTLIEHFGRRCQGWLEDDEG
HREQCDYRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALKLKDALVLRCSGMT
LQDGMDEKGSWLKMTYYDEDGADVSERFRLHTPAQKMAFEQLFMRPHTRTPGVPLRWITP
GDIIAQQALLRAPDFVVARQKDRYWQVREKVFDYQGRFRRAGELR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacatttacactacgcccatatcaacaggaagcggttgacgccaccctgacctatttt
cgccgccagaccgcccctgccgttatcgtcctaccaaccggtgcgggaaaaagcctggtt
atcgctgagctggcgcggcttgcgcgcggccgcgtgctggtactcgctcacgttaaagag
ctggtggcgcaaaaccatgccaaatacctcgcgctggggctggaggcggatatctacgcc
gctggccttaaacgcaaagagagccacggcaaagtggtgtttggcagcgtacagtccgtc
gcgcgaaatcttgaccattttcagggggagttctccctgctgattgtcgatgagtgccac
cgcatcagcgatgacgacgacagccagtatcagcaaatcctcatccatctcaggaaagtg
aatcctcacatccgcctgctggggctgacggcaaccccgttccggcttggcaaaggctgg
atttatcagtttcactaccacggcatggtacggggcgatgaaaaagcgctgttccgcgac
tgtatttacgaattgccgctacgctatatgataaagcatggctatctgacgccaccggag
cggctggatatgccggtcgtacagtatgatttcagccgcctacaggctaacagcaacggg
ttattcagcgaagccgatctgaaccgcgaactgaaacagcagcagcgtattacgccgcat
atcatcagccagattatcgaatttgcgcaggaccgtaagggggtgatgatttttgcttcc
accgtcgaacacgcccgcgaaatcaccggtctgctgcccgccaacgatgccgcgcttatc
accggcgaaacgccggggccgcagcgcgatgaattgattgatgcctttaaacatcagcaa
ttccgctatctggttaacgtctctgtgctgaccactggctttgacgccccacacgtcgac
ctgattgccattctccgtccaacggaatccatcagcctgtatcaacagattgtgggtcgc
ggcctgcgcctggcgccggggaaaaccgactgtttgattcttgactacgccggtaacccg
cacgatctctacacgccggaagtgggttcaccaaaagggaaaagcgataacgtaccggtg
caggtattctgccccggctgcggttttgccaatacgttctggggaaaaaccaccgctgac
ggtaccctgattgaacattttggtcgccgctgtcagggctggcttgaggatgacgaaggg
catcgcgagcagtgcgactaccgtttccgctttaaaaattgtccacagtgtaacgctgag
aacgatattgccgcccgtcgctgccgcgagtgcgacacggtattggttgacccggacgac
atgctaaaagcggcgctgaagctcaaagatgcactggtgctgcgctgtagcggaatgacc
ttgcaagacggtatggatgagaaagggagttggctgaaaatgacctactacgatgaagat
ggggccgatgtgagtgagcgcttccgcctgcacacgcctgcgcagaagatggccttcgag
cagttgttcatgcgtccgcatacgcgaacgcccggcgtaccactacgctggattacgccc
ggtgatattattgcccaacaggcgctgctccgcgccccggattttgtcgtcgcccgccaa
aaggatcgttactggcaggtacgtgaaaaagtgttcgactatcaggggcgctttcgtcgc
gctggcgagctacgctaa
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