Kluyvera intermedia: NCTC12125_00536
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Entry
NCTC12125_00536 CDS
T06042
Symbol
ycgE
Name
(GenBank) HTH-type transcriptional repressor YcgE
KO
K21089
MerR family transcriptional regulator, activator of the csg genes
Organism
kie
Kluyvera intermedia
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kie03000
]
NCTC12125_00536 (ycgE)
Transcription factors [BR:
kie03000
]
Prokaryotic type
Helix-turn-helix
MerR family
NCTC12125_00536 (ycgE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MlrA_C
MlrA_helical
MerR_1
MerR
HTH_Tnp_1
HTH_17
Terminase_5
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
VDZ82488
LinkDB
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Position
1:complement(504697..505416)
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AA seq
239 aa
AA seq
DB search
MALYTIGEVAQLCDINPVTLRAWQRRYALIKPQRTDGGHRLFNDADIDRIREIQRWIETG
VQVSKVKSLLSEQVDGWREQQELALRDLRNGNLNHLRQWVKELRHAHSARELVDNLFTPL
RLRLQSLQLPLHTLLGLLDGVLINDIALSLSAARRKSGPHALVVGWNITDLTRLWLEGWV
ACEQGWRVDVLAHSLAHVQPEHFPGQTLLVWCGSAPNAMQQHQLTRWQEDGIAFALPAN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttacacgattggcgaagtggcacagttgtgcgatatcaatcccgttacgctg
cgtgcctggcagcggcggtatgcgttaatcaaaccgcagcgtaccgacggcggtcaccgg
ctgtttaacgatgcggatatcgatcgcatccgcgaaattcagcgctggatcgaaaccggc
gtgcaggtcagtaaagtcaaaagtttgctcagtgaacaggtggatggttggcgggaacag
caggagctggcactgcgtgatttacgtaacggtaatcttaatcatcttcgtcaatgggtg
aaggaattgcgtcacgcccacagcgcgcgcgagctcgttgataaccttttcaccccgctg
cgcctgcgcttacaaagcctgcaactgccgctgcacacgctgctgggcctgcttgacggg
gtgttgataaacgatattgcattaagcctttccgccgcccggcgaaaatccgggccacac
gccttagtggtgggctggaacattactgacttaacgcgtttatggctggaaggttgggtc
gcctgcgagcaaggctggcgtgttgatgtgctggcacattcgctcgcccacgtgcagccg
gagcatttccccggccaaacgctgctggtgtggtgcggttccgctcccaacgcgatgcag
cagcatcagttgacccgctggcaagaggacggcattgccttcgcccttcctgccaattaa
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