Kluyvera intermedia: NCTC12125_01527
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Entry
NCTC12125_01527 CDS
T06042
Symbol
ycfS
Name
(GenBank) Probable L,D-transpeptidase YcfS precursor
KO
K19236
L,D-transpeptidase YcfS
Organism
kie
Kluyvera intermedia
Pathway
kie01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC12125_01527 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kie01002
]
NCTC12125_01527 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kie01011
]
NCTC12125_01527 (ycfS)
Peptidases and inhibitors [BR:
kie01002
]
Cysteine peptidases
Family C82
NCTC12125_01527 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
kie01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NCTC12125_01527 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
VDZ83437
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All DBs
Position
1:1404595..1405554
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AA seq
319 aa
AA seq
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MHQTLRLTRWLLGFALAASIVLPVSANTWPLPPPGSRLVGENRFHVVENNGGSLEAIAKK
YNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDVPREGIVLNLAELRLYYYPPGSNK
VTVYPIGIGQLGGDTITPTMVTTVSDKRANPTWTPTANIRARYKAQGVDLPAVMPAGPDN
PMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIKALFDEVKPGTKVNIIN
TPIKASIEPNGVHWVEVHQPLSEHIDDDPQTLPIVLNAGMKAFSQNANTDGEVMNKAMDV
RSGMPVDVSRHDAVSQQNM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaaactctgcgacttacacgctggctgctgggattcgctctcgccgctagtatt
gtgttaccggtcagcgccaacacctggcccttaccgccaccgggcagccgcctggtgggt
gagaaccgtttccatgtggtggaaaataacggcggctcgctggaagccatcgccaagaaa
tataacgtcggctttctggcactgttacaggccaatcccggcgtcgatccttacgttcct
cgcgctggcagcgtgttgaccatcccactgcaaaccctgctgccagacgtgccgcgtgaa
gggattgtgctcaatctggcggagctgcgtctttactattatccgccgggcagcaataag
gtgacggtctaccctatcggtatcggccaactgggcggcgatacaataaccccgacgatg
gtcaccaccgtgtccgataagcgggcaaacccaacctggacgccgaccgctaatattcgc
gcacgctataaagcacaaggcgttgatctcccggcagtgatgccagccggcccggataac
ccaatgggccaccatgccattcgcctcgcggcctacggtggcgtctatctattacacgga
accaacgccgattttggtatcgggatgcgcgtcagctcaggctgtattcgtctgcgtgac
ggtgatattaaagcgctgtttgatgaagtgaagccgggcaccaaagtgaatatcatcaac
acaccgattaaagcgtcaattgagcccaatggcgtgcattgggtggaagtccatcagccg
ctgtcagagcatattgatgacgatccgcaaacgctaccaatcgtcctcaacgccggtatg
aaagcgttcagtcaaaatgccaataccgacggtgaagtgatgaataaagcaatggatgtg
cgttcaggcatgccggttgatgtcagccgccatgacgcggtttcccagcagaatatgtag
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