Kluyvera intermedia: NCTC12125_01589
Help
Entry
NCTC12125_01589 CDS
T06042
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kie
Kluyvera intermedia
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kie03016
]
NCTC12125_01589 (rnb)
Enzymes [BR:
kie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NCTC12125_01589 (rnb)
Transfer RNA biogenesis [BR:
kie03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC12125_01589 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
VDZ83497
LinkDB
All DBs
Position
1:1460341..1462275
Genome browser
AA seq
644 aa
AA seq
DB search
MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHSEKEKESAEPEELVEPFLTRFVGRVHRKDDRLSIVPDHPLLKDAIPCRADRDVTH
DFKEGDWAVAQMRRHPLKGDRTFYAELTKFITYGDDHFVPWWVTLARHNLEKEAPDGVAT
EMQDEGIERRDLTALDFVTIDSASTEDMDDALFVEESTDGKLLLTVAIADPTAWIVEGSK
LDDAAKIRSFTNYLPGFNIPMLPRELSDDLCSLRANVVRPVLACRMTLSADGTIEDNIEF
FAANIESKAKLAYDDVSGWLENSGNWQPPSDAIAHQITLLERVCKLRSEWRKTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHTGFA
PDNTEALAALLKNHDVHVDPVEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISVE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGETAARPQDDITVQMAERRRLNRM
AERDVADWLYARYLSPQAGTETRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
MVCSQENGTVQIKGEVAYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggataacccgctgctcgcgcagctaaaacagcaacttcattcccaaacgcca
cgtgcagaaggggtcgttaaagccacggaaaaaggtttcggtttcctcgaagtcgatgca
caaaaaagctactttattccgccgccgcagatgaaaaaagtgatgcacggcgaccgcatt
attgccgtaatccattctgaaaaagaaaaagagagcgctgagccagaagaactggttgaa
ccgttcctgacccgttttgttggcagagtccatcgcaaagatgacaggctgtctatcgtg
cccgatcatcctctgcttaaggatgcaattccttgccgcgctgaccgcgatgtcacgcac
gattttaaagagggtgactgggccgttgcgcaaatgcgccgtcatccgctgaaaggcgat
cggacgttctacgccgaactgaccaaattcatcacctatggtgacgatcacttcgtgcca
tggtgggtcaccctcgcccgtcataatcttgaaaaagaagcgccagacggcgtggcgacc
gagatgcaggacgaaggcattgagcgtcgcgatcttaccgcgcttgattttgtcaccatc
gatagcgccagcaccgaagatatggacgatgcgctgtttgttgaagaatcaaccgacggc
aaactgctgctgaccgtggcgattgcggatcctaccgcgtggatcgtcgaaggcagcaag
ctcgatgatgcagccaaaattcgttccttcaccaactatctgccgggcttcaacattcca
atgctgccgcgcgaactgtcagacgacctgtgctctctgcgtgccaacgtagttcgcccg
gtactcgcttgtcgtatgactctgtctgctgacggtacgattgaagacaatatcgaattc
ttcgccgccaacattgagtccaaagccaaactggcctacgacgacgtctcgggctggctg
gaaaacagcggcaactggcagccaccaagtgacgcaattgcgcatcagattacgctgctg
gaacgtgtctgcaagctacgtagcgaatggcgtaaaactcatgcgctggtgtttaaagac
cgtccggactaccgcttcgtgctgggcgagaaaggcgaagtgctggacattgttgccgaa
ccacgtcgcattgctaaccgcatcgtggaagagtccatgatcgccgccaacatctgcgcc
gcacgcgtgctgcgtgataagctcggttttggcatttataacgtgcacacgggcttcgcg
ccagacaacaccgaagcgctggctgcgttactgaaaaaccatgacgttcacgttgatccg
gttgaagtcctgacgctggatggtttctgtaaacttcgtcgcgaactggatgctcaacca
accggattcctcgacagtcgtattcgtcgtttccagtcgtttgccgaaatcagcgtcgag
ccgggcccgcactttggcttaggtctggaagcttacgcaacctggacctcgcctatccgt
aaatacggtgacatggtcaaccatcgtctgctgaaagccatcatcaaaggcgaaaccgct
gcacgtccgcaagatgatatcaccgtacagatggccgaacgtcgtcgtctgaaccgtatg
gctgaacgcgatgtcgctgattggctgtacgcacgctacctcagcccgcaggcgggtact
gagacacgttttgccgccgagattatcgacgtcagccgtggcgggatgcgcgtacgtctg
gttgataacggcgcggttgcctttattccggcaccgttcctgcacgccgtgcgtgacgag
atggtttgcagccaggaaaacggcaccgtgcagatcaaaggtgaagtggcctataaagtt
accgatgtcattgatgtcaccatcgcggaagtccgtatggaaacccgcagcgtgatcgca
cgcccggccgcgtaa
DBGET
integrated database retrieval system
