Kluyvera intermedia: NCTC12125_01928
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Entry
NCTC12125_01928 CDS
T06042
Symbol
csdB_1
Name
(GenBank) 4-hydroxyphenylacetate decarboxylase large subunit
KO
K20038
choline trimethylamine-lyase [EC:
4.3.99.4
]
Organism
kie
Kluyvera intermedia
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NCTC12125_01928 (csdB_1)
Enzymes [BR:
kie01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.4 choline trimethylamine-lyase
NCTC12125_01928 (csdB_1)
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Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
VDZ83830
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All DBs
Position
1:1737878..1741264
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AA seq
1128 aa
AA seq
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MAHYSLTPRVKVLAERLLSQKSTLCTEHATVLSALDGDIAGIPAAVKPARRFYELMRQLP
LTISADELIVGNQTRKPHGAIFHDESAALRPSAFQFLNLNSALDSPDYKLVVEKGVLAIK
HQLEEKTRALGSAVSRSGMDEVNGCRAAIYACDALMALAQNLANSAETLAAAETNAYRKS
ELLDSAAILHHVPAHPARSFKEACQAFYLFQLALQLDNGSYAVNPEGADKALLPYYQHDI
ANGTLTDAQAYEIVECLWFKLAELSEVRAACTIDGYPMFDALLHGTSLENARINELSDMF
LCAQQNLSALHLPVRLFSGAKPVSVAPFAACSETPTAEGLTPRMQRLRNHYLTVRPSVSI
YRALAFTEVVKANPGMPTILLRAKAFRHACETAPILIQDDELIVGHPCGKPRAGAFSPDI
AWRWVRDELDTMSTRPQDPFEISEADKKTIREEIVPFWEGRSLDEICEAQYREAGVWAFS
GETFVSDLSYHQINGGGDTCPGYDVLLFTKGMNGIKADAEAHLASLSMENPEDIDRIYYY
KAAIETCEGVVSYAHRIAARARELAATEQNAQRRAELLTIAEVNQNVPANPPKTLQEALQ
SIWTVESLFEIEENQTGLSLGRVDQYCYPMFEADIREGRLTHDAALEMMQAFIIKCAELM
WMSSELGAKYFAGYQPFINLTVGGQKRSGGDACNDLTYLIMDAVRFVKVYQPSLACRIHN
QSPQKYMEKIVDVVKAGMGFPACHFDDSHIKMMLRKGFDFEDARDYCLMGCVEPQKSGRI
YQWTSTGYTQWPIAIEFVLNRGRMVLFDSYQGLDTGDLRDLHTFEEFDAAVKKQIAHIVR
LSAIGTVISQRVHRDVAPKPLMSLLVEGCMEQGKDVAAGGAMVNHGPGLIFSGLATYVDS
LAAIRKLVFEDKKYTLEQMRDAMLANFEGFEGLRRDCLNAPKYGNDDNYVDQYALDITEW
TERECRKYKMLYSTLSHGTLSISNNTPIGELTNATPNGRLAWMPLSDGISPTQGADKQGP
TAIIKSVSKMNVETMNIGMVHNFKFLKGLLDTPEGRYGLITLLRTASILGNGQMQFSYVD
NEVLKKAQQEPEKYRDLIVRVAGYSAYFVELCKEVQDEIISRTVIEKF
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggcacactacagcttaacgccgcgcgtcaaagtgttggcagaacgtttactctcacaa
aaaagcaccctgtgtactgaacacgcgacggtattgagcgcccttgatggcgatatcgcg
ggcattcccgccgccgtcaaaccggcgcgccgtttctatgagctgatgcgccagttgccg
ctgaccatcagcgctgacgaactgatcgtcggcaaccagacccgcaaaccacacggggcg
attttccacgacgaaagcgccgccctgcgtccgtccgcattccagttccttaacctcaat
agcgctctcgattcaccggactacaaactggtggtcgaaaaaggcgtgctggcgattaaa
caccagcttgaagagaaaacccgcgctctgggcagcgccgtcagccgcagcggcatggac
gaagtcaacggctgccgcgccgccatttacgcctgcgacgcgctgatggcgctggcgcaa
aatctggcaaacagtgccgaaacgcttgccgctgctgaaaccaatgcttaccgcaaaagc
gaactgctagacagtgcagcgatcttacaccacgttccagcgcacccggcgcgcagcttt
aaagaagcctgccaggcattctacctgttccagctggcactccagttggataacggcagc
tacgcggtgaacccggaaggggcagataaagcgctgctgccttactaccagcacgatatc
gccaacggcacattgaccgatgcacaggcctatgaaatcgtcgagtgcctgtggttcaaa
ctggcagaactgagcgaagtccgcgccgcctgcaccatcgacggctacccgatgttcgat
gccctgctccacggtacaagccttgagaacgcccgcatcaacgaactctctgacatgttc
ctctgcgcccagcaaaatctcagcgccctgcacctgccagtccgtctgttcagcggggca
aaacccgtatctgtcgcgccgtttgccgcctgtagcgaaacgccaaccgccgaggggtta
accccgcgtatgcagcgcctgcgcaaccactacctgaccgtgcgcccaagcgtttctatt
taccgtgcgctggcctttaccgaagtagtgaaagccaacccaggcatgccaaccattctg
ctgcgcgccaaagcgttccgtcacgcctgcgaaaccgcaccaattctgattcaggatgat
gagctgatcgtcggccatccatgcggcaaaccgcgtgcgggtgcgttctcaccggatatc
gcctggcgctgggtccgcgacgaactcgacaccatgagcacccgtccacaggatccgttt
gaaatcagcgaagccgataaaaaaaccatccgcgaagagatcgtgccgttctgggaaggc
cgctcgctggatgagatctgtgaagcgcagtaccgtgaagcaggcgtgtgggcttttagc
ggcgaaaccttcgtcagcgacctctcctatcaccagatcaacggcggcggcgacacctgc
ccgggctacgacgtgttgctgttcaccaaagggatgaatgggattaaggccgacgccgag
gcgcatctcgccagcctgagcatggaaaacccggaagatatcgaccgcatttactactac
aaagcggcgattgaaacctgcgaaggggtggtgagctacgcccaccgcatcgccgcgcgc
gcccgtgaactggcagctactgagcagaatgcccagcgtcgcgccgagctgctgaccatc
gccgaagtgaaccaaaacgttccagcgaacccaccgaagactttgcaggaagcactgcaa
agtatctggaccgtcgaatcgctgtttgaaattgaagagaaccagaccggtctgtcgctg
ggtcgcgttgaccagtactgctacccgatgtttgaagccgatatccgcgaaggccgtctg
acgcacgacgccgcgctggagatgatgcaggcctttatcatcaaatgtgccgaactgatg
tggatgtccagcgaactgggcgcgaaatatttcgctggttatcagccatttatcaacctg
accgtcggcggtcagaagcgttccggcggcgatgcctgtaacgatctgacctacctgatt
atggacgccgtgcgctttgtgaaggtttaccagccgtcgctggcctgccgtattcacaac
cagtcgccgcagaagtacatggaaaaaatcgtcgatgtggtgaaagcgggcatgggcttc
ccggcctgtcacttcgatgactcgcatatcaagatgatgctgcgcaaaggctttgatttt
gaagacgcgcgcgactactgcctgatgggctgcgtggagccacagaaatccggccgcatc
taccagtggacttctaccggttatacccagtggccgattgccatcgagttcgtcttaaac
cgtggtcgcatggtgctgtttgacagctatcaggggctggataccggcgacctgcgcgac
ctgcataccttcgaagagttcgatgcggcggtgaaaaagcaaattgcccatattgttcgc
ctgtcggctatcggtacggtgataagccaacgcgtgcatcgcgacgtcgcgccaaaaccg
ctgatgtcgctgctggtggaaggctgtatggagcaaggtaaagacgtcgctgccggtggc
gcgatggtcaaccacgggccggggctgatcttctccgggctggcaacctacgtcgactcc
ctggctgccatccgtaaactggtgtttgaagataaaaaatacacccttgagcagatgcgc
gatgcgatgctggccaacttcgaaggctttgaaggtctgcgtcgcgactgcctgaacgcg
ccgaaatacggtaacgatgataactacgttgaccagtacgcgctggatatcaccgagtgg
accgagcgcgagtgccgcaagtacaagatgctctactccaccttaagccacggcaccctg
tctatctccaacaacacgccaatcggtgagctgaccaacgccacgccgaacggtcgtctg
gcgtggatgccgctttctgacggtatcagcccaacccagggcgcagataaacaaggccca
accgccatcatcaagtcggtgagcaagatgaacgtggagaccatgaacatcggcatggtg
cacaacttcaagttcctcaaagggctgctggataccccggaaggacgctacggcctgatt
accttactgcgcaccgcctcgattctcggcaacggccagatgcagttcagctatgtcgat
aacgaagtgctgaaaaaagcccagcaggagccggaaaaataccgcgacctgatcgttcgc
gtcgcgggctacagcgcctacttcgtggaactgtgcaaagaagttcaggacgaaatcatc
agccgtacggtgattgagaagttctga
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