Kluyvera intermedia: NCTC12125_02840
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Entry
NCTC12125_02840 CDS
T06042
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kie
Kluyvera intermedia
Pathway
kie03030
DNA replication
kie03430
Mismatch repair
kie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12125_02840 (dnaE)
03430 Mismatch repair
NCTC12125_02840 (dnaE)
03440 Homologous recombination
NCTC12125_02840 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kie03032
]
NCTC12125_02840 (dnaE)
03400 DNA repair and recombination proteins [BR:
kie03400
]
NCTC12125_02840 (dnaE)
Enzymes [BR:
kie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12125_02840 (dnaE)
DNA replication proteins [BR:
kie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12125_02840 (dnaE)
DNA repair and recombination proteins [BR:
kie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12125_02840 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
VDZ84704
LinkDB
All DBs
Position
1:complement(2581187..2584669)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFHVQSELFGDELTQLTVLAANNVGYQNLTLLISKAYQRGYGAAGPIIDRDW
LVELKEGLILLSGARMGDVGRALLRGNMALVEQCAEFYETHFPNAYFLELIRTGRQDEEA
YLHAAVRLAETRGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSTQQYM
RSEDEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGEMTTEDFLVAKSHEGL
EERLEFLFPDPKERAEKRPPYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRERNGEPPLDIATIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEDGAKSRGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNQDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCMPWPEHTVLEGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIASRVMVTKRGNRIGICTLD
DRSGRLEVMLFTEALEKYQHLLENDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtgcacctgcgggtgcatagcgactactccatgatcgatggg
ctggcgaaaaccgggccgctggtaaaaaaggcggccgcgttgggcatgcctgcgctggcg
atcaccgattttaccaacctctgcggcctggtgaagttctacggagcggggcatggtgct
ggtatcaaaccaattgttggcgccgactttcacgtccagagcgaactgtttggtgatgaa
ctcacccagttgacggtgctggcggcgaacaacgttggctatcaaaatctgacgctgctc
atctcgaaagcctatcagcgcggttacggtgcggcagggccaattatcgatcgtgattgg
ctggtggaattaaaagaagggttaattctgctctccggtgcgcgtatgggcgacgtcggc
cgtgctttactgcgcggcaatatggcattggttgagcaatgcgccgagttttacgaaaca
catttcccaaacgcttatttccttgagctcattcgtaccggtcgtcaggatgaagaggct
taccttcatgcagcggtcaggctcgcggaaacacgcggcctgccggttgtggccaccaac
gatgttcgttttcttgaacccggtgactttgacgcgcacgaaattcgcgtggcgatccac
gatggtttcaccctcgatgatcctaaacgcccgcgcaactactccacgcagcagtatatg
cgtagcgaagacgagatgtgcgagctgttctccgatatcccggaagcgctggaaaacagc
gttgagatagcaaaacgttgtaatgttacggtgcgtcttggcgaatacttcctgccacag
ttcccgacaggtgaaatgaccaccgaggatttcctcgtagccaaatcgcatgaaggtctg
gaagaacgcctggaatttctgttccccgatccaaaagagcgcgcggagaaacgcccgcct
tacgatgaacgtctggaaattgaacttaaagttatcaaccagatgggcttcccgggctac
ttcctgatcgtgatggaatttatccagtggtcaaaagacaacggcgtaccggttgggccg
ggacgtggttcgggcgcgggctcgctggtagcctatgcgctgaaaattaccgacctcgat
ccgctggagtttgacctgctgttcgaacgcttcctgaacccagaacgtgtctcgatgcct
gacttcgacgttgacttctgtatggagaaacgcgatctggttatcgaacacgtggccgaa
atgtacgggcgtgatgcggtatcgcagattattactttcggtacgatggcggcgaaagcg
gttatccgcgacgtgggtcgcgtactggggcatccgtacgggttcgttgatcgtatctca
aaactggtgccgccagacccagggatgacgctggcgaaagcttttgaagcggaaccccag
ttacccgaaatttacgaggcagatgaagaagttcgcgcgctgatcgatatggctcgcaag
cttgaaggggtcacccgtaacgccggtaaacacgccggtggtgtggttatcgctccgact
aaaattaccgattttgcgccgctgtactgtgatgaacaggggctgcacccggttacccag
tttgataagaatgacgtggaatacgccggtctggtgaagttcgacttcctgggtttgcgt
acgcttactatcatcaactgggcgctggagatgatcaacgcccgccgtgaacgcaacggt
gagccgccgttggatatcgcgaccattccactggaagataagaaaagcttcgacatgctg
caacgctcggaaaccactgcggtcttccagcttgaatcccgcggcatgaaagatctgatt
aaacgtctacaacctgactgcttcgaagatatgatagccctggtggccctgttccgcccg
ggcccgctacagtcgggaatggtagataactttatcgaccgtaagcacggacgtgaagaa
atctcgtacccggatgttcagtggcagcatgaatgtctgaagccggtgctggaaccgaca
tatggcattatcctgtaccaggaacaggttatgcagattgcccaggagctttccggctat
actctcggcggcgcggatatgttgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggcacttttgaagatggtgcgaagagccgcggcgtggatggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttatgggtttaacaaatctcac
tccgcagcctatgcgctggtctcttatcagacgctgtggctgaaagcgcactacccggcc
gagtttatggcggcggtaatgactgccgatatggacaacaccgagaaggtggtagggctg
gtggatgagtgctggcggatggggctgaaaatattgccgccagatatcaattccggttta
tatcatttccacgttaatcaggacggggaaatcgtgtatggtatcggcgcgattaaaggc
gtcggtgaaggcccgattgaagcgatcattgaagcgcgcaataacgggggctatttccgc
gagctgtttgacctgtgcgcgcgtaccgacacgaaaaagcttaaccgcagagtgctggaa
aaattgattatgtccggggcgttcgaccgccttgggccacaccgtgcggcgctgatgaat
tcgctgggcgatgcgttaaaagcggccgatcagcatgcgaaagcggaagctattggtcag
gcggatatgttcggtgtgttagccgaagagccagagcagattgagcagtcttatgctaac
tgtatgccctggcctgaacatacggtactggaaggtgagcgggaaacgttagggttatac
ttaacgggtcacccaatcaaccaatacctgaaagaaattgagcgctatgtcggcggctat
cggctaaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtg
attgcctcaagggttatggtcaccaagcgaggcaatcgtatcggcatctgtacgttggat
gaccgatccggaaggctagaagtgatgttattcaccgaagccctggaaaaataccagcat
ctgctggaaaacgaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggcggccttaaaatgatggcccgcgaagtgatggacattgacgaagcccgggaaaaatac
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccatcgttcgggaaccattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgtttcggtgcaacctggcgtgtctctccgagcgat
cgtttactcaacgatttgcgtggcctcatcggttcggagcaggtggaactggagtttgac
taa
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