Kluyvera intermedia: NCTC12125_02890
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Entry
NCTC12125_02890 CDS
T06042
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase precursor
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
kie
Kluyvera intermedia
Pathway
kie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12125_02890 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kie03019
]
NCTC12125_02890 (pcnB)
Enzymes [BR:
kie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NCTC12125_02890 (pcnB)
Messenger RNA biogenesis [BR:
kie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC12125_02890 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
VDZ84753
LinkDB
All DBs
Position
1:2635256..2636620
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AA seq
454 aa
AA seq
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MLSREESEAENAVAKPAMTVIPREQHAISRKDISENALKVLYRLNKSGYEAYLVGGGVRD
LLLGKKPKDFDVTTSATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEDGQ
SDRTTSQRGQNGMLLRDNIFGSIEDDAQRRDFTINSLYYSVADFTVRDYVGGMQDLSDGV
IRLIGDPETRYREDPVRMLRAVRFAAKLSMRISPETAEPIPRLATLMHDVPPARLFEEAL
KLLQAGYGYETYTLLREYNLFQPLFPTITRYFTEEGDSPMERIIAQVLKNTDNRIHNDMR
VNPAFLFAAMFWYPLLEMAQKIAQESGLVYHDAFALAMNEVLDEACRSLAIPKRITALVR
DIWQLQLRMSRRQGKRAWKLMEHPKFRAAYDLLALRAEAENNHELQRLTQWWSEFQVIAP
PAQKEMLNELDEEPDSRRRHRRPRKRAPRREGSA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgctaagccgtgaggagagcgaggctgagaacgccgttgctaaacctgctatgaccgtc
attccgcgcgagcagcacgctatttcccgcaaagatattagcgagaacgccctcaaggtt
ctttatcgtctgaataaatcaggctacgaggcttacctcgtcggcggcggtgtccgcgac
ctgcttttaggcaaaaaaccgaaagatttcgatgtgaccaccagcgccactccagatcag
gtgcgcaagctattccgcaactgccgtctggtcggtcgccgtttccgtctggcccacgtt
atgtttggcccggaaattatcgaggtcgccactttccgtggtcatcatgaagatggtcag
tctgaccgtaccacctcccagcgtgggcaaaacggcatgctgctgcgtgataacatcttc
ggctccatcgaagacgatgcccagcgccgcgactttaccattaacagcctttactacagc
gtggccgactttaccgttcgcgactacgtcggcggcatgcaggatttgtcagatggcgtc
attcgcctgattggcgatcctgaaactcgctaccgtgaagatccggtacgcatgctgcgc
gccgtacgtttcgccgccaagctgtctatgcgtatcagcccggaaaccgcagagcctatc
ccacgtctggcgaccttaatgcacgacgtgccgccggcacgcctgtttgaagaagcgctc
aagctgcttcaggccggctatggctacgaaacctacacgctgctgcgtgaatacaatctg
ttccagccgttgttcccgaccatcacccgctacttcaccgaagagggtgatagcccgatg
gagcgcatcattgcgcaggtgctgaagaacactgacaaccgtattcacaatgatatgcgc
gtcaatccagcattcctgttcgctgcgatgttctggtatccactgctcgaaatggcgcag
aaaattgcccaggaaagcggtctggtctaccacgacgcctttgcgctagcgatgaacgaa
gtgctggatgaggcctgtcgttcactggcgataccaaagcgcattaccgcgctggtgcgt
gatatctggcagctacagctgcgtatgtcccgtcgtcaggggaaacgtgcctggaagctg
atggagcatccaaaattccgcgctgcctacgacctgctggcattgcgtgctgaagcggaa
aacaaccacgagctacagcgtctgacacagtggtggagtgaattccaggtcattgcgcca
ccggcgcaaaaagagatgctcaatgagctggatgaagaacccgattcccgccgccgtcat
cgtcgcccacgtaaacgcgcaccgcgtcgcgagggtagtgcgtga
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