Kluyvera intermedia: NCTC12125_02980
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Entry
NCTC12125_02980 CDS
T06042
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
kie
Kluyvera intermedia
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kie03021
]
NCTC12125_02980 (rapA)
Transcription machinery [BR:
kie03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NCTC12125_02980 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
GT_PLOD
Motif
Other DBs
NCBI-ProteinID:
VDZ84838
LinkDB
All DBs
Position
1:2731853..2734759
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFSATGENRLYSRSDSPVTRVMFNPGDT
ITSHEGWQLQVDEVKEENGLLAYIGTRQDTEEANVMLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAQRVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDMMVVDEAHHLVWSENAPSREYQAIE
QLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQNNYRPVADAVALLL
AGNKLSNDDLNMLGELIGEQDIEALLQTANSERDGAEAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKREFHTIKLPLPAQYQTAIKVSGIMGARKSAEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFGEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVHDKLTTYLAAPETV
EGFDDLIKTSRDQHEALKVQLEQGRDRLLEIHSNGGEKAQKLAESIEEQDDDTNLIAFAM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTVTFERDIALSREDAQFLTWE
HPLIHNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGTNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEGQIEKAAQ
ALIDAARQEADDKLSAELSRLEALKAVNPNIRDDELSAIESNRQQVMESLSQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggataagcgatacagaaagcgaactgggacttggt
actgttgttgcaatggatgcacgcaccgtcaccctgctcttttcggcaaccggagagaac
cgtctgtattcccgtagcgactcccccgtgacccgcgtaatgtttaatcccggcgacacg
attacaagccatgaaggctggcagttgcaggttgatgaagtaaaagaagaaaacggtctg
ctggcgtacattggtacccgccaggacaccgaagaagcgaacgttatgctgcgtgaagtg
ctgctcgacagcaaactggtattcagcaaaccacaagaccgcctgtttgccgggcaaatc
gaccgtatggatcgtttcgccctgcgctaccgtgcgcgtaaataccaaagcgagcagtac
cgtatgccgtggagcggcttacgcggccagcgtactagcctgattccgcatcagctcaac
atcgcacacgatgttggtcgtcgccacgcgccacgcgttctgctggcggatgaagtcggt
ctgggtaaaaccattgaagcagggatgatcctgcaccaacagttactgtctggtgccgca
cagcgcgtgctgattatcgtcccggaaaccctgcaacatcagtggctggtcgaaatgctt
cgccgcttcaacctgcgctttgcgctgtttgatgacgaacgctacgccgaagcccagcac
gacgcctacaacccgtttgaaaccgaacagttagtcatttgctcattggacttcgtgcgc
cggagtaagcagcgccttgagcacctgtgcgatgccgaatgggacatgatggtcgtggat
gaagcccaccacctggtgtggagcgaaaacgcgccaagccgcgagtatcaggcaattgaa
cagttggctgaacgcgtaccagggatcctgctgctgaccgcgaccccggaacagctggga
atggaaagccactttgcccgtctgcgcctgctcgacccaaaccgcttccacgattttgag
cagtttgttgaagaacaaaataattatcgtccggttgccgatgccgttgcactgctgctg
gcaggtaataagctcagcaacgatgacctgaatatgctcggcgagctgattggcgagcag
gatattgaagccctgctgcaaaccgccaacagcgaacgcgacggcgcagaagccgcgcgt
caggaactggtttccatgctgatggaccgccacggcaccagccgcgtgttgttccgtaac
acccgtaacggcgtgaaaggcttcccgaaacgcgagttccacaccatcaagctgccgctg
ccagctcagtaccagacagccattaaagtctccggcatcatgggcgcacgtaaaagcgct
gaagaacgcgctcgcgacatgctgtacccggagcagatttatcaggagtttgaaggagac
accggtacctggtggaacttcgacccacgcgtcgaatggctgatgggctacctgaccagc
caccgctcgcagaaagtactggtgatctgcgccaaagccaccactgcattgcagttagag
caggttctgcgtgagcgcgaaggtatccgcgccgccgtgttccacgaaggcatgtcaatt
atcgaacgcgaccgcgcagcggcctggtttggtgaagaagacagcggcgcgcaggtactg
ctgtgttcagaaatcggttcagaaggccgtaacttccagttcgccagtaacctggtgatg
tttgatctgccgttcaacccggatctgctggaacagcgtattggccgtcttgaccgtatc
ggtcaggcgcacgatattcagattcacgtcccataccttgaaaaaaccgcccagtccgtg
ctggtgcgctggtatcacgaaggtctggacgcattcgagcatacctgcccaaccggtcgt
accatttacgacagcgtgcacgataagctgacgacctatctggccgcgccagaaaccgtc
gaaggtttcgacgatctgatcaaaaccagccgcgaccagcacgaagcgctgaaagtgcag
ctggaacagggtcgcgaccgtctgctggagatccactccaacggcggcgaaaaagcgcag
aaattggcagaaagcatcgaagagcaggatgacgacaccaatcttatcgcctttgcgatg
aacctgtttgatatcgttggtatcaaccaggatgaccgtggtgaaaacctgatcgtcctg
accccgtccgatcatatgctggtgccggacttcccgggcctgccggaagatggctgtacg
gtgacctttgagcgtgatattgccctgtcgcgtgaagatgcgcagttcctgacctgggaa
cacccgctgattcataacggtctggatctgatcctctccggcgataccggtagcagcacc
atttcactgctgaaaaacaaagcgctgccggtcggtacattgctggttgagctgatttac
gtggtggaagcacaagcgcctaaacagcttcagcttaaccgcttcctgccgccgacgccg
gtacgcatgttgctggataagaacggaaccaacctcgccgcacaggtcgagtttgaaacc
ttcaaccgtcagcttagcgcggttaaccgccacaccggcagtaagctggtgaatgcggtt
cagcaggacgttcacgcgattctgcaactgggcgaagggcagattgagaaagcggcgcag
gcattgattgacgccgcacgtcaggaagcggacgacaagctcagtgcggaactgtcgcgt
ctggaagcgctgaaggcggtgaacccgaacatccgcgatgacgaattgtctgccattgaa
agtaaccgccagcaggtgatggaaagtctgtcgcaggcaggatggcgtctggacgcgctg
cgtcttatcgtcgtcactcaccagtaa
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