KEGG   Kluyvera intermedia: NCTC12125_03087
Entry
NCTC12125_03087   CDS       T06042                                 
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
kie  Kluyvera intermedia
Pathway
kie03030  DNA replication
kie03430  Mismatch repair
kie03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kie00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC12125_03087 (holD)
   03430 Mismatch repair
    NCTC12125_03087 (holD)
   03440 Homologous recombination
    NCTC12125_03087 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kie03032]
    NCTC12125_03087 (holD)
   03400 DNA repair and recombination proteins [BR:kie03400]
    NCTC12125_03087 (holD)
Enzymes [BR:kie01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCTC12125_03087 (holD)
DNA replication proteins [BR:kie03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NCTC12125_03087 (holD)
DNA repair and recombination proteins [BR:kie03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NCTC12125_03087 (holD)
SSDB
Motif
Pfam: DNA_III_psi CSTF_C
Other DBs
NCBI-ProteinID: VDZ84943
LinkDB
Position
1:complement(2837527..2837940)
AA seq 137 aa
MTSRRDWQLQQLGITQWSLRRPGALQGEIAITLPPHVRLVMVGEALPALTESLVSDILRA
LCMTPDQVLPLTPDRVAMLPEGSRCHCWHLGNDMPTTLEGVTLSTPSFNELQASAPARAA
LWRQICAHEHDFYPQHD
NT seq 414 nt   +upstreamnt  +downstreamnt
atgacatcccggcgagactggcaattacaacagttgggtattacccagtggtcactgcgc
cgccccggggcgctacagggtgaaatcgccattacgcttccgccgcacgtccgtttagtg
atggttggcgaggcgttacccgcgctgacggagtcgctggtgagcgatattctacgcgct
ttgtgtatgacgccagaccaggttttaccgctgacgcccgatcgcgtagcgatgctaccg
gaaggtagccgctgtcactgctggcatcttggcaacgatatgccgacgaccctggaaggg
gttacgctatcgacgccttcatttaatgaactgcaagccagcgcgcctgcgcgcgccgcg
ctttggcgacaaatttgcgctcatgaacacgatttctaccctcagcacgactga

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