Kluyvera intermedia: NCTC12125_03681
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Entry
NCTC12125_03681 CDS
T06042
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
kie
Kluyvera intermedia
Pathway
kie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12125_03681 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kie03400
]
NCTC12125_03681 (priA)
Enzymes [BR:
kie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12125_03681 (priA)
DNA repair and recombination proteins [BR:
kie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12125_03681 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
IBR_1
Motif
Other DBs
NCBI-ProteinID:
VDZ85485
LinkDB
All DBs
Position
1:3405777..3407972
Genome browser
AA seq
731 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPDNLSAKAGCRVRVPFGKQERVGIVVSVNESSELPITELK
AVAEVLDEEPVFSSAVWRLLLWAADYYHHPIGDVLFHALPILLRQGKPASATPQWFWFAT
EQGQAVDINTLKRSPKQQQALAALRQGKIWRHQVAELEFNETAMQALRTKGLSELGSIAP
ETVDWRTAYSVPGERLRLNTEQATAVGAIHSASDEFSAWLLEGVTGSGKTEVYLSVLENI
LSKGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLAAWLKAKSGEAAIVI
GTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSEQIPIILGSATPAL
ETLLNARQHKYRMLRLTRRAGNARPATQHVLDLKGQHLQAGLSPALINRMRQHLQADNQV
ILFLNRRGFAPTLLCHDCGWIAECPRCDSYYTLHQAQHHLRCHHCDSQRPIPRQCPSCGS
THMVPVGLGTEQLEHALAPMFPGVPLSRIDRDTTSRKGALEQHLAEVHRGGARILIGTQM
LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHHP
DHPLLQTLLYKGYDAFAEQALAERQTMQLPPYTSHVLIRAEDHNSQQAPLFLQQLRNLIQ
ASPLADDKLWVIGPVPALAPKRGGRYRWQILLQHPSRVRLQHIVTGTLALINTLPESRKV
KWVLDVDPIEG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgctcacgttgctctgcctgttccactgccccgtacatttgactacctgctg
cctgacaatctcagcgccaaagcgggctgtcgcgtgcgcgtgccgtttggcaaacaagag
cgcgtggggatcgtggtgtcagttaacgaaagcagcgaactccctattacggagcttaag
gccgttgcagaagtgctggacgaagaaccggtgttttcatctgccgtctggcgtctgctg
ctgtgggcggccgactattatcatcacccgattggcgacgtattgtttcacgcgctgccc
attttgctgcgtcaggggaaacctgccagcgccacgccgcagtggttctggtttgccaca
gaacaagggcaggcggtggatatcaacacgcttaaacgctcgcctaagcagcaacaagcg
ctggcggcgttacgtcaggggaaaatctggcgtcatcaggtggcagagcttgaattcaat
gaaaccgccatgcaggcgctgcgcaccaaaggcctgagcgaactcggcagtatcgccccg
gaaaccgtagactggcgcaccgcctattccgtaccgggcgagcggctgcggctcaatacc
gaacaggcaacggcagtgggcgcgattcatagcgcatcagatgaattttccgcatggctg
ctggaaggggtgaccggctcggggaaaaccgaggtctacctcagcgtgctggaaaacata
ctctcaaaaggcaaacaggcgctggtgatggtgccagaaattggcctgacgccgcagact
atcgcccgcttccgcgagcgttttaacgcgccagttgaagtactgcactcggggcttaac
gacagcgagcgccttgccgcctggctgaaagccaaaagtggtgaagcggcgattgttatc
ggcactcgctcatcgctgtttacgccgtttaaaaatcttggcgtcatcgtgatagatgaa
gagcacgatagctcttacaagcagcaggaaggctggcgttatcatgctcgtgacctcgcc
gtatggcgcgcccacagcgagcaaatcccgattattctgggttccgccacgcctgcgctg
gaaaccctgctgaacgcccgccagcataaatatcgcatgctgcgtttaacccgccgcgcg
ggtaacgcgcgcccagccactcagcacgtgctcgatctcaaaggccagcatttacaggcc
gggctttccccagcgctgataaaccgcatgcgtcagcacctgcaagccgataatcaggtg
atcttattcctgaatcgccggggctttgcaccgacgctgctgtgtcacgactgcggctgg
attgccgagtgcccacgctgcgatagctactacactctgcaccaggctcagcatcatctg
cgctgccaccattgcgacagccagcgccctatcccacgccagtgcccatcgtgcggctcc
acgcatatggtgccggtcggtctgggaaccgaacagcttgaacacgcgctggcccccatg
ttccccggcgtaccgctgtcgcgtattgaccgcgataccaccagccgtaaaggggcgcta
gagcagcatctggcggaagtgcatcgcggcggcgcccgtattcttatcggcacacagatg
ctggcaaaagggcaccattttcccgacgtcacgctggttgctctgctcgacgttgacggc
gcactcttctccgccgacttccgctcagccgaacgctttgcccagctttatacccaggtc
tctggccgtgcgggacgtgcaggtaagcaaggcgaagtcgttttacaaacccaccatcct
gaccatcctttgctgcaaacgctgctgtataaaggttatgacgcctttgccgagcaggcg
ctggccgagcggcagacgatgcaactcccgccgtataccagccacgtgttgattcgcgcg
gaagaccacaatagccagcaggccccgctgttcctgcaacagctacgcaatctcattcag
gcgagcccgctggcagacgataaactgtgggtgattggcccggtaccggcgctggcgccg
aagcgcggcggtcgatatcgctggcaaatcctgttacagcacccttcacgcgtgcgctta
caacatatcgtcaccggcacgctggcgcttatcaatacgctccctgaatcccgtaaggtg
aagtgggttctcgacgtcgatcctatcgaaggttaa
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