Kluyvera intermedia: NCTC12125_03797
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Entry
NCTC12125_03797 CDS
T06042
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kie
Kluyvera intermedia
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kie03032
]
NCTC12125_03797 (gyrB)
03400 DNA repair and recombination proteins [BR:
kie03400
]
NCTC12125_03797 (gyrB)
Enzymes [BR:
kie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC12125_03797 (gyrB)
DNA replication proteins [BR:
kie03032
]
Prokaryotic type
DNA Topoisomerases
NCTC12125_03797 (gyrB)
DNA repair and recombination proteins [BR:
kie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC12125_03797 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
VDZ85593
LinkDB
All DBs
Position
1:3521968..3524382
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AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELLIRREGKVHQQTYVHGVPQAPLAVTGETEATGTQVRFWPSHETFTNVI
EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFIEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHTNAHAPALSGEALEKLVSEYNGTQKMIGRMERR
YPRSLLKELVYQPTLTEADLVDEAKVTAWVSQLVNVLNENEMHGSTWNSLVRKDAELNLF
EPVIRVRTHGVDTDYPLDNEFITGGEYRRLCTLGEKLRGLIEDDAFIERGERRQPVASFE
QALEWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPDSRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggtgacacggatgacggcaccggtctgcaccacatggta
ttcgaggttgtggataacgctatcgacgaagcgctcgcgggtcactgtaaagacatcgtg
gtgacgattcacgctgacaactccgtgtccgtgaccgatgatggccgtggtattccaacc
ggtattcacccggaagaaggcgtttctgcggccgaagttatcatgaccgttctgcacgca
ggcggtaaatttgatgataactcctataaagtgtccggtggtttgcacggcgtaggtgtt
tcggttgttaacgccctgtcgcagaaactggaattgctgatccgccgcgaaggcaaagta
catcagcaaacttatgtccacggtgtgccacaggctccgctggcggtaaccggtgaaacg
gaagcgaccggtacacaggtgcgtttctggccaagccacgaaaccttcaccaacgtaatc
gaattcgaatatgagattctggcaaaacgtctgcgcgagctgtcattcctgaactccggc
gtttccatccgtctgcgcgataagcgtgacggcaaagaagaccatttccactatgaaggt
ggtatcaaggcgtttattgagtatctcaataaaaataaaacgcctattcacccgaatatc
ttctacttctccaccgaaaaagacggtattggcgtagaagtggcgttgcagtggaacgat
ggtttccaggaaaacatctactgcttcaccaacaacattccacagcgtgatggcggtact
caccttgcaggcttccgtgcggcgatgacccgtacgctgaacgcttacatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggtgatgatgcccgtgaaggcctgatt
gccgtcgtttccgtaaaagtaccggatccgaaattctcctctcagaccaaagacaaactg
gtctcttctgaggtgaaaacggcggtagaacagcagatgaatgaactgctgagcgaatac
ctgctggaaaacccgtctgacgccaaaatcgtcgtcggaaaaattattgatgcagcacgt
gcccgtgaagccgcacgtcgtgcgcgtgaaatgactcgccgtaaaggcgcgctggactta
gcaggcctgccgggcaaactggcggactgtcaggaacgcgacccggcccactctgaactg
tacttagtggaaggggactcagcgggcggctctgcaaaacaggggcgtaaccgtaagaac
caggcgattctgccgctgaagggtaaaatccttaacgttgagaaagcgcgcttcgacaag
atgctcgcttctcaggaagttgccacgctgattaccgcactaggctgtggtattggtcgt
gacgaatacaacccggataaactgcgctatcacagcatcatcatcatgaccgatgccgac
gttgatggttcacacatccgtacgctgctgttgaccttcttctatcgtcagatgccagaa
atcgttgagcgtggccacgtctacatcgctcagccgccgctgtacaaagtgaagaaaggc
aagcaggaacagtacatcaaagatgatgaagcgatggatcaataccagatctctatcgct
cttgatggcgcaaccctgcataccaacgcccatgcaccggcactgtcgggtgaagcgctg
gaaaaactggtttctgagtacaacggtacgcagaaaatgattggccgcatggagcgccgc
tatccgcgttcactgctcaaagagctggtctatcagccaacgctgaccgaagccgatctg
gttgatgaagcgaaagtcacggcctgggtttcccagttggtaaacgtgctgaatgaaaat
gaaatgcacggtagcacctggaatagccttgtccgtaaagatgccgagttgaatctgttc
gaaccggttatccgtgtacgtactcacggtgtcgacaccgattatccactggataacgaa
ttcatcactggtggtgaataccgccgtctttgcacgctgggcgagaagctgcgtggcctg
attgaagacgatgcattcatcgaacgtggcgaacgccgtcagccggttgccagcttcgaa
caagcgctggagtggctggtgaaagaatctcgtcgtggcctctccattcagcgttataaa
ggtctgggcgaaatgaacccggatcagctgtgggaaaccactatggacccagacagccgt
cgcatgctgcgtgtgaccgttaaagatgcgattgctgctgaccagctgttcaccaccctg
atgggcgatgccgttgaaccgcgtcgtgcgtttatcgaagagaatgccttgaaagcggcg
aacatcgatatctaa
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