Kluyvera intermedia: NCTC12125_03939
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Entry
NCTC12125_03939 CDS
T06042
Symbol
rfaL
Name
(GenBank) O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
kie
Kluyvera intermedia
Pathway
kie00540
Lipopolysaccharide biosynthesis
kie01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC12125_03939 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kie01005
]
NCTC12125_03939 (rfaL)
Enzymes [BR:
kie01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
NCTC12125_03939 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
kie01005
]
Core region
NCTC12125_03939 (rfaL)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Wzy_C
MogR_DNAbind
NADH-u_ox-rdase
Cas_Csn2
Motif
Other DBs
NCBI-ProteinID:
VDZ85730
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All DBs
Position
1:complement(3659506..3660750)
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AA seq
414 aa
AA seq
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MMSKKVADNVFYTITTGLCFLALLLLPFQQDFAMKSLRIAGEVALLVIFISPRKYLKSDT
IYIAISLLVLSVLYFAWFRIYKTPDSEYVGAYMNYRDWSLVGIFSAFTIPVISTAREQFK
KLTNYAHLAISLLVIAVYIVYSCYQYFILHDTRAILSLTYGPGAPAAAYTITFISLYSLI
TVSTLVNKYRLPLLILIGFASFIAISATATRAGMITYPILFAFIFWKEVQGYSSKQKKMC
IYAFLALAVVSASVLHKPIVKRVNDLTADIIKYNANNSETSVGARFAMYKTGFESSYNNV
IGQPLEERNEKIKSIIANNKDLSGARHYLNVHLHNQLIDTLSTTGWLGVTLNILFLLAVI
IYIHKQHFPLMYTYVVAMMMFSLSDTLTYSTPIPLAWLLTLVLMCSLMNNKSQN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaaaaaagttgctgataatgtgttttacacgatcactacaggattgtgtttc
ctcgcattattacttcttccctttcaacaagattttgcaatgaaatccttgagaatcgcc
ggggaagtggcgttgttggttattttcatttcaccacgcaagtaccttaagtctgatact
atatatatagcaatcagtcttcttgttttatcggtattatattttgcgtggttcaggata
tataaaacccctgattctgaatatgtcggcgcttacatgaactatcgcgactggagcctc
gttgggatattttcagcatttaccatccccgttatttcaacggcaagagagcagttcaaa
aagctaacaaactatgctcatttggcgatttcgttactggttatcgctgtctacatagtt
tactcgtgctaccaatattttattctccatgataccagagcaatactctcactgacatat
gggcctggtgcaccagcggctgcatacactatcacattcatttccctatattcattgata
accgtatcaacactggtcaataaatacaggttaccattgctcatattgataggatttgcc
agtttcattgctatttctgccacagcaacacgagcaggaatgatcacctacccgattctc
tttgcatttattttctggaaagaagtacaggggtatagcagcaaacagaaaaaaatgtgt
atttatgcatttctagcacttgctgtcgtgtctgcttccgtactgcataaacccatcgta
aaaagggtaaatgatttaacagcggacattatcaaatataatgccaataactcagaaaca
tccgttggcgcacgctttgccatgtataaaacgggttttgagtcgtcgtataataacgtt
atagggcagccattagaagaacgtaacgagaagatcaaaagcatcatcgctaataataaa
gatctctctggtgcacgccattatcttaatgttcacctgcacaatcaattgattgatacg
ttatccaccactggctggttaggcgttaccttaaacattctatttctgcttgctgtcatt
atttatatccataagcaacacttcccattgatgtatacttatgtcgtggccatgatgatg
tttagcttaagcgatactttgacatactcaaccccgataccactcgcatggttactgacg
ctggtactgatgtgttctttaatgaataacaaatcccagaactaa
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