KEGG   Kluyvera intermedia: NCTC12125_04421
Entry
NCTC12125_04421   CDS       T06042                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
kie  Kluyvera intermedia
Pathway
kie02020  Two-component system
kie02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:kie00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NCTC12125_04421
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NCTC12125_04421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kie03021]
    NCTC12125_04421
Transcription machinery [BR:kie03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC12125_04421
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: VDZ86197
LinkDB
Position
1:complement(4108297..4109730)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHEEVETQE
PVDTETLDSVDALEKPDMPEELPLDASWDEIYTAGTPSGNGVDYQDDELPVYQGETTQSL
QDYLMWQVELTPFTDTDRAIATSIVDAVDDTGYLTVTVEDIHEGIGDDEIGLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFSPDTPRITEARLIISDHLDLLANHDFRSLMRVTR
LKEDVLKEAVDLIQSLDPRPGQSIQTGEPEYVIPDVLVRKVNGHWMVELNSDSIPRLQIN
QHYAGMCNNARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFDLGEE
HMKPMVLADIAQTVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVSTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTLLSNQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaattaaggctcagccaacagcttgccatgacgccgcagttgcag
caggcaatccgtctgttgcagttgtctacgttggaacttcagcaggaactccagcaggcg
ctggagagtaaccccctgctcgagcaaaccgatcttcacgaggaagtagaaacccaggaa
cccgtcgataccgaaacgctcgacagcgtagatgcactggaaaagccggacatgccggaa
gaactaccgctcgacgccagttgggatgaaatctacactgccggcacgccatcgggcaac
ggggtcgattaccaagacgacgaactgccggtttaccagggcgaaaccactcagtcactg
caggattacctgatgtggcaggtcgagctgacgccgtttaccgatactgaccgggcgatt
gccacttcgatagtcgatgcggtagacgataccggctatctcaccgttacggtggaagat
atccatgaaggcattggcgatgacgagattggtctcgatgaagtagaggccgtgcttaaa
cggatccaacgattcgatccggtcggcgtcgccgccaaagatctccgcgactgtctgctg
atccaactttctcagttctcacctgatacgccacgcattactgaagcgcgcttaatcatc
agcgatcatctcgatcttctcgccaaccacgactttcgttcacttatgcgcgttacgcgc
ttaaaagaagatgtgctcaaagaagcagtcgatctgattcaatcactcgatccacgtcct
gggcaatcgatccagaccggcgagccggaatatgtgatccctgatgtgctggtgcgcaaa
gtgaacggtcattggatggttgagcttaattccgacagcatcccgcgcctgcagataaac
cagcattatgcggggatgtgcaacaatgcccgcaacgacgctgacagccagttcatccgc
agtaatctgcaggatgctaagtggctgattaaaagccttgagagccgtaatgacacgctg
ttgcgcgtaagccgctgcattgttgagcagcagcaggcctttttcgatcttggcgaagaa
cacatgaaaccgatggtgctggccgatatcgcccagaccgtcgagatgcacgagtccacg
atttcgcgtgttaccacgcagaagtatttgcatagcccacggggcatttttgagcttaag
tatttcttctccagccacgtcagtaccgaaggcggcggcgaagcctcgtccacggccatc
cgtgcgttggtgaagaagttaattgctgcggagaatcccgcaaaaccactgagcgacagt
aaactgaccaccctactctccaatcagggtatcatggtggcccggcgtacggttgcaaag
taccgagagtctttatccatcccgccgtcgaaccagcgtaaacagctggtctga

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