Kluyvera intermedia: NCTC12125_04461
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Entry
NCTC12125_04461 CDS
T06042
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kie
Kluyvera intermedia
Pathway
kie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12125_04461 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kie03019
]
NCTC12125_04461 (pnp)
03016 Transfer RNA biogenesis [BR:
kie03016
]
NCTC12125_04461 (pnp)
Enzymes [BR:
kie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC12125_04461 (pnp)
Messenger RNA biogenesis [BR:
kie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC12125_04461 (pnp)
Transfer RNA biogenesis [BR:
kie03016
]
Prokaryotic type
tRNA degradation factors
NCTC12125_04461 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
VDZ86231
LinkDB
All DBs
Position
1:4141303..4143432
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AA seq
709 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKTKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFINEVQVIATVVSV
NPQINPDIVAMIGASAALSLSGLPFNGPIGSARVGYINDQYVLNPTQDELKESKLNLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQIVIKEINELVKEAGKPRWDWQPEAVNE
ALNARVAALAEARLSDAYRITDKQERYAQVGVIKSETIDALVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTTR
DAQNLDELMGERTDNFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPDLDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQAALNQAKGARLHILGVMEQA
INAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMNQEVPVKVLEVDRQGRVRLSIKEATEQSSTAPVEPAAEQGE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaagttccagtacggccaacacaccgtcacgctggaaacc
ggcatgatggcgcgtcaggcgactgcagccgttatggttagcatggatgacaccgcggta
ttcgtgaccgttgttggtcagaaaaaaaccaagccaggccaggactttttcccgctgacc
gttaactatcaggagcgtacctacgctgctggccgtattccaggaagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggtttcattaacgaagttcaggttatcgcaaccgtggtttccgtt
aaccctcagatcaacccagatatcgtggcaatgatcggtgcatctgctgcgctgtccctg
tccggcctgccgttcaacggcccgatcggctctgcacgcgttggttatatcaatgaccag
tacgtactgaacccgactcaggatgagctgaaagaaagcaaactgaacctggttgttgcc
ggtactgaagccgccgtactgatggttgaatccgaagcagaactgctgagcgaagaccag
atgctgggtgctgtcgtgtttggtcacgaccagcagcagattgttatcaaagaaatcaac
gagctggtaaaagaagccggcaaaccacgttgggattggcagcctgaagccgtcaacgaa
gcgctgaacgcgcgcgttgctgcgctggctgaagcgcgcttgagcgacgcttaccgcatc
accgacaaacaagagcgttatgctcaggttggcgtgatcaaatctgaaaccatcgacgca
ctggttgcagaagacgaaaccctggacgctaacgaactgggtgaaatcctgcacgctatc
gagaaaaatgttgttcgtagccgcgtgctggcaggcgagccacgtatcgatggccgtgaa
aaagacatgatccgtggtctggacgttcgtactggcgtactgccacgtactcacggttct
gcactgttcacccgtggcgaaactcaggcgctggttaccgcgaccctgggcaccacccgt
gatgcacagaacctcgacgagttgatgggcgagcgtactgacaacttcctgttccactac
aacttccctccgtactgcgtaggcgaaactggcatggtaggctctcctaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtgatgccggatctggacaaa
ttcccgtacaccgtacgtgttgtgtctgaaatcaccgaatccaatggttcttcttccatg
gcttccgtgtgtggtgcttctctggcgctgatggacgcaggtgtgccaatcaaagcagcc
gttgccggtatcgcgatgggtctggtgaaagaaggcgacaactacgttgttctgtctgac
atcctgggcgacgaagatcacctgggtgatatggacttcaaagttgcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggcatcaccaaggagatcatgcag
gctgcactgaaccaggctaaaggtgcgcgtctgcacatcctgggtgtgatggaacaggcg
attaacgcgccacgtggcgatatctctcagttcgctccgcgtatccacacgatcaaaatc
agcccagacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgctctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgatggtaccgtgaagatcgcagcaacc
gacggtgaaaaagcgaaatacgcgattcgtcgtatcgaagagatcaccgcagaaatcgaa
gtgggtcgtatctacaacggtaaagtgacccgtatcgttgactttggtgcattcgttgcc
atcggtggtggtaaagaaggtctggtacacatctctcagatcgctgacaagcgcgttgag
aaagtgaccgattatctgcagatgaaccaggaagtgccggttaaagttctggaagttgac
cgtcagggccgcgtacgtctgagcatcaaagaagcaactgaacagtcttctaccgcaccg
gttgaaccggcagcggaacaaggcgagtaa
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