Kluyvera intermedia: NCTC12125_04842
Help
Entry
NCTC12125_04842 CDS
T06042
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
kie
Kluyvera intermedia
Pathway
kie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12125_04842 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kie03019
]
NCTC12125_04842 (rppH)
Messenger RNA biogenesis [BR:
kie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC12125_04842 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
VDZ86603
LinkDB
All DBs
Position
1:4505684..4506214
Genome browser
AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLIGNDADINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALAESAPKPQSAPAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaatgttggtattgtaatttgcaatcgtcagggc
caggtcatgtgggcccggcgctatggtcagcactcctggcaattcccgcaagggggtatt
aaccccggtgagacagcagaacaggcgatgtatcgggaactgttcgaagaagtaggatta
agccgtaaggatgtacggatcctcgcttcgacccgaaactggttgcgttacaagttgcca
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccagaaacagaagtggttt
cttttgcagttgatcggcaatgacgcggacatcaatatgcaaaccagcagcacgccggaa
ttcgatggctggcgctgggtgagttactggtatccggtgcgccaggtagtttcgtttaaa
cgtgacgtctaccgccgggtaatgaaagagttcgccagtgtcgtgatggcgcttgctgaa
agcgcgccaaaaccgcaaagcgcgcctgcgtatcgacgtaaaagaggttaa
DBGET
integrated database retrieval system
