Kluyvera intermedia: NCTC12125_04854
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Entry
NCTC12125_04854 CDS
T06042
Symbol
recB_2
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kie
Kluyvera intermedia
Pathway
kie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12125_04854 (recB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kie03400
]
NCTC12125_04854 (recB_2)
Enzymes [BR:
kie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC12125_04854 (recB_2)
DNA repair and recombination proteins [BR:
kie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12125_04854 (recB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
DUF8054_M
Motif
Other DBs
NCBI-ProteinID:
VDZ86615
LinkDB
All DBs
Position
1:4519731..4522283
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AA seq
850 aa
AA seq
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MTEIREAVAQEKRRRGELGFDDMLSRLDEALHGDSGDALAAAIRQRFPVAMIDEFQDTDP
QQYRIFRRIWRQQPETALLLIGDPKQAIYAFRGADIFTYMRARGDVAAHYTLDTNWRSAP
GMVESVNRLFGLVDNPFMFRDIPFLPVKSASKNASLRFEVDGENQPAMNLWLMPGEGISA
GDYQNFMAGQCAAQIRDWLTGGQRGTALLWRGDKAQPVQASDITVLVRNRQEASLIRDAL
NALAIPSVYLSNRDSVFETPEAQELLWVLQAVLTPERENALRSALATAMFGLNARDIEQL
NQDENAWDALVEEFTEYRNTWLRRGVMPMLRALMSARSIAENLLATHGGERRLTDILHLS
ELLQEAATQLESEHALVRWLNQQVAEPDTNASSQQMRLESDKHLVQIVTIHKSKGLEYPL
VWLPFIARFRKQNQAFYHDRNSFAAVLDLNESDESLELAEAERLAEDLRLLYVALTRAVW
HCSLGIAPLTARRSDKPTDTELHHSAPGRLLQKGEVLDAAGLEACLRALCDEHIALTLAT
PPDDTRWQPTQAAMPELAARQVLRRVLDDWRVTSYSGLQQRGHSVAQDLLPRLDIDAVGT
GETLPELELTPHNFPRGASPGTFLHSLFEDLDFTQPISPEWMQEQLQNNGFGEHWEPVLT
AWISQVLEAPLADTGIALNQLSAREKQVEMEFYLPIETTLDARALDALTRRYDPLSAGCP
ELDFRQVRGMLKGFIDLVFRHDGRYYLLDYKSNHLGDSGEAYTQQAMAQAMQSHRYDLQY
QLYSLALHRYLRHRLADYDYERHFGGVIYLFLRGVDGDAGQQGIFTTRPDRELITAMDAL
FAGVEQEMDA
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagatccgtgaagctgtagcccaggagaaacgtcgtcgcggtgaattgggcttt
gacgatatgctcagccgtcttgatgaagcgttgcatggtgacagcggtgatgcgctggcc
gccgctattcgtcagcgttttccggtggcgatgatcgatgaattccaggataccgacccg
cagcaatatcgtattttccgccgtatctggcggcagcagccggagaccgcgttgctgcta
attggtgaccctaaacaggcgatttatgccttccgcggcgccgatatctttacctatatg
cgcgcacgtggcgatgtggccgcgcattacaccctcgacaccaactggcgttctgcgccg
gggatggttgagagcgtcaaccgcctgttcgggctggttgataatccctttatgttccgc
gacattccgttcctgccggttaaatcagcgagcaaaaatgcctcgttgcgctttgaggtt
gacggcgaaaaccaaccggcgatgaacctgtggctgatgcctggagaaggcatcagcgca
ggcgattaccagaactttatggcggggcagtgcgcggcacaaattcgcgactggctgacc
ggcggtcagcgtggtacggcgttactgtggcgtggcgacaaggcccagccggtacaggct
tccgatatcaccgtgctggtgcgtaaccgccaggaggcgtcgctgattcgtgacgcactg
aacgcgctggcgattccctcggtctatctctctaaccgcgatagcgtgtttgaaaccccg
gaagcacaggagttactgtgggtactgcaagcggtgttgacgccggagcgcgaaaacgcc
ctacgcagcgcgctggcaacggcgatgtttggccttaacgcccgggatattgagcaacta
aaccaggatgaaaatgcctgggatgcgctggtggaagagttcacggaataccgcaatacc
tggctgcgtcgcggcgtgatgccgatgctccgcgcgctaatgagcgcccgatcgattgcc
gaaaacctgctggcgactcacggcggagaaagacgtttaaccgacatcctgcacctgagc
gaactgctgcaagaggccgccacccagcttgaaagtgaacacgcgctggtgcgctggctc
aatcagcaggttgccgagccggataccaatgcctccagccagcagatgcgtctggagagc
gataaacacctggtgcagattgtcaccattcacaaatcaaaagggctggaatatccgctg
gtctggctaccgtttatcgcccgtttccgtaagcagaatcaggcgttctaccacgaccgc
aactcctttgcggcggtactcgatcttaacgaaagcgacgaaagccttgagctggccgaa
gctgagcgactggcagaagacctgcgtctgctgtacgtcgcgttaacccgcgccgtctgg
cactgtagcttaggcattgcgccactcaccgcgcgacgcagcgacaaaccaaccgatact
gaattacaccacagtgcgccggggcggttgctgcaaaaaggcgaggtgctggatgccgcg
ggccttgaagcttgcctacgcgcgttgtgcgacgaacatattgcgctcacgctcgccacg
ccgccggatgatacccgctggcagccaacgcaggccgccatgccagaactggcggcgcga
caggtattgcgacgcgtactcgatgactggcgagtcaccagttattccggcttgcagcag
cgcgggcacagcgtggcacaggacctgctgccgcgtctggatatcgacgcggtcggcacg
ggcgaaacgctgcctgaactggaactgacgccgcacaacttcccgcgcggcgcatcacca
gggacgttcctgcatagcctgtttgaagacctcgacttcacgcagcccatttcacctgaa
tggatgcaagaacagttgcaaaacaatggctttggcgaacactgggagccagtgctgact
gcctggatatcgcaggtactggaagcaccgctggcggataccggtattgccctaaaccaa
ctgagtgcgcgggaaaaacaggtcgagatggagttttatctgccgattgaaacgacgctg
gacgcccgtgcgttggacgcgctcacccgccgctacgacccgctctccgcaggctgcccg
gaactcgatttccgtcaggtgcgcggtatgctcaaaggttttattgacctcgtgttccgc
cacgacgggcgatactacctgctggactacaaatccaaccatttaggggatagcggcgaa
gcctatacccagcaggcgatggcgcaagcgatgcagtcgcaccgctatgacctgcaatat
cagctttatagcctggcgctgcaccgctatttgcgtcatcgccttgccgattatgactac
gagcgtcactttggcggcgtgatttacctgttcctgcgcggcgtcgacggcgacgcgggg
cagcaggggatatttacgactcggcccgatcgcgaactgattacggcaatggacgcgctg
tttgctggcgttgaacaggagatggatgcatga
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