Kluyvera intermedia: NCTC12125_04855
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Entry
NCTC12125_04855 CDS
T06042
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kie
Kluyvera intermedia
Pathway
kie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12125_04855 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kie03400
]
NCTC12125_04855 (recD)
Enzymes [BR:
kie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC12125_04855 (recD)
DNA repair and recombination proteins [BR:
kie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12125_04855 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_28
CbiA
SRP54
MukB
UvrD_C
NTPase_1
AAA_7
DO-GTPase1
T2SSE
AAA
FtsK_SpoIIIE
ATPase
DEAD
TrwB_AAD_bind
DUF6079_2nd
Motif
Other DBs
NCBI-ProteinID:
VDZ86616
LinkDB
All DBs
Position
1:4522280..4524118
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AA seq
612 aa
AA seq
DB search
MTLEQRLLEAVELKLLRPLDVQFALMVAQDEHPAVMLAAVMLSRDTGEGHVCLPLSHLTP
AMQPKGRARELWQQLFADAGEPEDWSALLLASQAVSVGERPSPLILSRERLYLNRMWRNE
LTVARFFSDTQAPFAVDEPQLAATLNALFPLSDTVDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALVQMSGTQKCRIRLAAPTGKAAARLTESLGAALRKLNLSDEQKAMLPSD
ASTLHRLLGAQPGSQKMRYHADNPLHLDVLVVDEASMIDLPMMARLIDALPPHGRVIFLG
DRDQLASVEAGAVLGDICSWVNHGYTAERALELSRLVGADVPAGEGHAASALRDSLCLLR
TSYRFGSDSGIGQLAGAVNRGDKKTVSEVFTRGFSDIELKALRTTDDYAAMLDDARAGYG
HYLQSLRDRADPALVLAAFGEYQILCALREGPWGVSGLNTQFELLLTRHRQIVPQRHSRW
YEGRPVMITRNDSALGLFNGDIGIALDRGQGTRVWFPMPDGTIKSVQPSRLPEHDTAWAM
TVHKSQGSEFTNAALVLPTQIVPVVSRELVYTAITRAKARLSMYADENLLVQAIATRTER
RSGLAAIFAEMT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacgctggaacaacgcttattagaagctgtagaactcaagctgctgcgcccgctggac
gtgcagtttgcgctgatggtggcgcaggatgaacatccggcggtgatgctggcggcagtg
atgctcagtcgtgataccggcgaagggcacgtctgtttgccgctctcccatctaacgccc
gcgatgcagccaaaggggcgcgcacgggaactgtggcagcagctctttgccgacgcgggc
gaacctgaagactggtcagcattgttacttgcctcgcaagcggtgagtgtgggtgagcgt
ccatcgccgctgattttgagccgtgagcgtctttatttgaaccgcatgtggcgcaacgaa
ctcaccgtggcacgcttctttagcgacacccaggcgccgtttgccgttgacgagccacag
cttgccgccacgctgaacgcgctgtttccgctcagtgacacggtagactggcagaaggtc
gcagccgccgtggcgctgacgcggcgtatttcggtgatttccggcggccccggcaccggg
aaaaccaccaccgtcgccaaactgctggcggcgctggtccagatgtccggcacacaaaag
tgccgtattcgtttagccgcaccgaccgggaaggccgccgcgcgattaaccgaatcgcta
ggtgctgcgctgcgtaagctcaacctgagtgacgaacaaaaagcgatgctgccgagcgat
gccagcacgctgcaccgcctgttgggcgcacagcccggcagccagaaaatgcgctatcac
gccgataatccgctgcaccttgacgtgctggtggtcgatgaagcctcaatgattgacctg
ccgatgatggcacggttgattgatgcgctgccgccgcatgggcgggtgattttcctcggc
gaccgcgatcaattagcctccgttgaggccggtgccgtgctcggtgatatttgtagctgg
gttaaccacggctataccgcggaacgcgcgcttgagcttagtcgcctcgtcggtgctgac
gtgcctgccggtgaaggacatgcggcaagcgcgctgcgcgacagcctgtgcctgctgcgc
accagctaccgttttggcagcgactcgggcatcgggcaactggccggtgcagtgaaccgg
ggtgataaaaaaacggtgagtgaggtcttcacgcgtgggtttagcgatattgaactcaag
gcgctacgtaccacggacgattacgccgcgatgcttgacgatgcgcgcgcgggctacggt
cattatctccagtcgttgcgtgaccgagccgaccccgcgcttgtgctggcggcgtttggc
gaatatcaaatcctctgcgcgctgcgggaagggccgtggggagttagtgggttgaatacg
cagtttgaactgctgctgacgcgccatcggcagattgtccctcagcgccattctcgctgg
tatgaagggcgtccggtgatgatcactcgtaatgacagcgcgctggggctgtttaacggc
gatattggcattgcgctagaccgagggcaggggacgcgtgtctggttcccgatgccggat
ggcacgattaaatcggtgcagccaagccgcttgcctgagcacgacaccgcctgggcgatg
acggtgcataaatcgcagggttcagaattcaccaatgcagcgctggtgctgccgacgcag
attgtgccagtggtgagccgtgagctggtgtacacggcgattacccgtgcgaaagcgcga
ttgtcgatgtatgccgatgagaatctgctagtgcaggcgattgccacgcgtaccgagcgg
cgtagtgggctggcggcgatttttgcggagatgacgtaa
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