Kocuria marina subsp. indica: KocCE7_00030
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Entry
KocCE7_00030 CDS
T05866
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
kii
Kocuria marina subsp. indica
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kii03032
]
KocCE7_00030 (gyrA)
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_00030 (gyrA)
Enzymes [BR:
kii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KocCE7_00030 (gyrA)
DNA replication proteins [BR:
kii03032
]
Prokaryotic type
DNA Topoisomerases
KocCE7_00030 (gyrA)
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KocCE7_00030 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SHE3
IFT20
Motif
Other DBs
NCBI-ProteinID:
QBJ20437
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Position
7679..10405
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AA seq
908 aa
AA seq
DB search
MSDETQDGNGPVDPQGAPEAGDGVVTDEVAITGDRVEQIDLQTEMQRSYLDYAMAVIVGR
ALPDVRDGLKPVHRRVLYTMYDGGYRPDRSFNKCARVVGDVMGNYHPHGDSAIYDALVRL
IQDWIMRYPLALGQGNFGSPGNDGAAAPRYTETKMAPLAMEMVQGIHEDTVDFQDNYDGK
QQEPVVLPARFPNLLVNGSSGIAVGMATNIPPHNLREVADGVQWYLKNPHVDRETLLEEL
IKRIKGPDFPSGAQILGHKGIEQAYRTGRGSITQRAVVSVEEIHNRTCLVVTELPYQVNP
DNLAIKIADLVKEGRVQGIADMRDETSGRTGQRLVIVLKRDAVPKVVLNNLYKHTQLQEN
FSANMLALVDGVPRTLSLDAFVHHWVTHQMEVIVRRTTYRLKQAQEEAHILIGLLKALDA
LDEVIALIRRSPTVEQARTGLMELLEIDEAQAQAILNMQLRRLAALERQKIQDRHAELQR
LIAEYESIIASEERQREIISEELQGIVDHYGDDRRTEVLYGFDGDVSMEDLIPQEQVVVT
ITRDGYVKRTRADEYRAQHRGGRGIKGAQLRGDDVVEHFFVTSTHNWILFFTTLGRVYRV
KAYEFVEAGRDAKGQHVANLMEFQPEERIAQVMELHSYQDAPYLVLATRNGLIKKSRLTD
YDTNRSAGVIAINLRENDELVSAMLVNTDDDVMLISRLGQSLRFTADDDALRPMGRATSG
VTGMKFRPGDELLSANVVSDDSYVFVVTEGGYAKRTSVQEYRVQGRGGLGIKVAKLAEVR
GGQVGGLIVGENDEVLVVMESGKVVRSNVSEVPARGRDTMGVIFAKPGPNDAIVGVARNA
EREIEKEVAEEDAAEATGPSDVAPGSTTDSPEATTADVPAGQDGADAAAPVGDDDAVALE
HNDNGGDA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagacgcaggacggcaacggccccgtggacccgcagggcgcacccgaggcc
ggcgacggcgtcgtgaccgacgaggtggcgatcacgggcgaccgcgtggagcagatcgat
ctccagacggagatgcagcgctcctacctggactacgccatggcggtgattgtggggcgc
gcgctgccggacgtgcgggacggtctcaagcccgtgcaccggcgggtgctctacacaatg
tacgacggcggttaccgccccgatcgttcgttcaacaagtgcgcgcgcgtggtgggcgac
gtgatgggcaactaccacccgcacggtgactccgcgatctacgacgccctggtgcgactg
atccaggactggatcatgcgctacccgctcgcgctggggcagggcaacttcggttccccc
ggtaacgacggcgctgcggccccccggtacaccgagaccaagatggcgcctctggccatg
gagatggtccagggcatccacgaggacaccgtggacttccaggacaactacgacggcaag
cagcaggaacccgtggtgctgcccgcgcggttccccaacctgctggtcaatggctcctcc
ggcatcgcggtgggcatggccaccaacatccccccgcacaacctgcgcgaggtcgcggac
ggcgtgcagtggtacctcaagaacccgcacgtggaccgcgagaccctgctcgaagaactc
atcaagcgaatcaagggtccggacttcccctccggggcgcagatcctcggccacaagggc
atcgaacaggcctaccgcaccggtcgtggttccatcacgcagcgcgcggtggtcagtgtg
gaggagatccacaaccgcacgtgcctcgtggtcacggagctgccgtaccaggtcaacccg
gacaacctggccatcaagatcgcggacctcgtcaaggaagggcgggtccagggcatcgcc
gacatgcgcgacgagacctcggggcgcacgggtcagcggttggtgatcgtgctcaagcgg
gacgccgtacccaaggtcgtgctcaacaacctctacaagcacacgcagttgcaggagaac
ttctccgcgaacatgctcgcgctcgtggacggggtgccccggacgctctccctggacgcg
ttcgtgcaccactgggtcacccaccagatggaagtcatcgtccggcgcaccacgtaccgc
ctcaagcaggcgcaggaggaagcgcacatcctgatcggcctgctcaaggccctggacgcc
ctggacgaggtcatcgccctgatccggcgctcgcccaccgtggagcaggcacgcaccggg
cttatggagctgctcgagatcgacgaggcccaggcccaggcgatcctcaacatgcagttg
cgccgcctggccgcgctcgaacggcagaagatccaggaccggcacgccgagctgcagcgg
ttgatcgccgagtacgagtcgatcatcgcgtccgaggagcgtcagcgcgagattatctcg
gaggaactgcagggcatcgtggaccactacggtgacgaccgccgcaccgaggtgctctac
ggcttcgacggggacgtctccatggaggacctcatcccgcaggagcaggtggtcgtgacc
atcacgcgcgacggctatgtcaagcgaacccgcgcggacgagtaccgcgctcagcaccga
ggtggccgcggcatcaagggcgcgcagttgcgcggcgacgacgtcgtggagcacttcttc
gtgacgagcacccacaactggatcctgttcttcacgaccctcgggcgcgtctaccgcgtc
aaagcctacgagttcgtggaggccggccgggacgccaagggccagcacgtggccaacctc
atggagttccagcccgaggaacgcatcgcccaggtcatggagctgcactcctaccaggac
gccccgtacctcgtgctcgcgacccgcaacgggttgatcaagaagtcgcggctcacggac
tacgacaccaatcgttccgcaggcgtgatcgcgatcaacctgcgcgagaacgacgagttg
gtctcggccatgctcgtgaacaccgacgacgacgtcatgctgatctcgcgcctgggccag
tccctgcggttcaccgctgacgacgacgccctgcgccccatgggtcgcgcgacctccggt
gtcacgggcatgaagttccgccccggggacgagttgctctccgccaacgtggtcagcgac
gactcctacgtgttcgtggtgaccgagggcggctacgccaagcgcacgagcgtccaggag
taccgcgtgcagggccgtggtggcctgggcatcaaggttgccaaactcgccgaggtccgc
ggtggccaggtgggcgggctgatcgtgggcgagaacgacgaggtgctcgtggtcatggag
agcggcaaggtcgtgcgctccaacgtgagcgaggtccccgcccgcggccgtgacacgatg
ggtgtgatcttcgccaagccgggtcccaacgacgccatcgtgggggtcgcccgcaacgcc
gagcgggagatcgagaaggaggtcgcggaggaggatgccgccgaggccaccgggccgagc
gacgtcgcccccggctccacgacggactcccccgaagccacgaccgcggacgtccccgcg
ggccaggacggtgccgacgccgctgcgccggtcggtgacgacgatgcagtagcgttggag
cacaacgacaacggaggtgacgcatga
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