Kocuria marina subsp. indica: KocCE7_01275
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Entry
KocCE7_01275 CDS
T05866
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
kii
Kocuria marina subsp. indica
Pathway
kii03030
DNA replication
kii03430
Mismatch repair
kii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KocCE7_01275
03430 Mismatch repair
KocCE7_01275
03440 Homologous recombination
KocCE7_01275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kii03032
]
KocCE7_01275
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_01275
Enzymes [BR:
kii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KocCE7_01275
DNA replication proteins [BR:
kii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KocCE7_01275
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KocCE7_01275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
Rad17
AAA_14
AAA_19
Mg_chelatase
AAA_5
AAA_18
AAA_28
zf-CXXC
AAA_16
nSTAND3
ORC-CDC6-like
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QBJ20643
LinkDB
All DBs
Position
complement(299061..302699)
Genome browser
AA seq
1212 aa
AA seq
DB search
MTTALYRRYRPETFQDVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARC
LNCAEGPTATPCGHCESCQDLARDGAGSLDVIEMDAASHGGVDHARDLRERATFAPVRDR
YKIFIIDEAHMVTREGFNALLKIVEEPPEHVKFIFATTEPSKVLTTIRSRTHHYPFRLVP
PEPLMRYLEQLCQEEGVTTEPGVLSLVVRAGGGSVRDSLSVLDQLMAGSDDGGITYDLAV
ALLGYTHAALLDDVVDAFAAGDAATVFASVDRVIQTGQDPRRFVEDLLERFRDLVVVNAV
PDSAANILHGMPTDQINRLRNQATQLGAAELSRSADITNEALNEMTGATSPQLHLELLCA
RILLPSADHTTRGITSRVDRLERRLSIPRGTGIRTTAHDAASSSPAVEPTARGSQEPRSP
EQSGTAAPAPASHDAPAPESAGVPSPMPPALDDAATDSVAPSQPVRPDGSAADGADGSAT
GRPAEETPDVQEPTDPQDYSEQPEGSSHPAAADPVPEDERGPDAQHPPADGTTDTRSPAA
QDAGADVSARMQQRETSNQYGSQRPDDAASRQYAQGEPRRDVAPHDDHQPQAPQASEEQA
APSDVTSGELELLRSSWPEIVSALAEIRRVAWAITVRGTPISFENRTLRIAFENDGDLLN
FPRFEADVRNAIQSVVGLDCAVEAVRPGDTRGRQDTPGAGGPPSNAGRGTGPGPGRDAGG
GQGYRGDRPAPRGGGPQNAQGSRQDRGSQQDRSYQRDDSSSEHGQQYGPGPRQGSDSHDG
ADAGYGPGSRRDTGASRGDGPTGRDTRLNASSRAGSSDQPDYFREPEGFGVNRRRGNPPA
PDREPTPERESRSMPDSASRSTSGTDRSSVPASSSHSAPASAPDDDEPVTSWSVASIPQP
GFAAPSGGDSTSKTADAAPTRDDSDQNPDTSDSSVGDSSRDDAHRATDSPADDRAGTGDS
TSVPSREGLGSASDSADVGATSWTPGVPASDGPGSDVPASDDSAAFESHDPGAASGGPDL
SMRDGSMRDGSVRDGSVPEDPASGAPSFRAPQPRDRGPEYWSPEEPPPPPEDDPPADMYD
EPVPRAPSPARDRRAQGGNGPGGDNPAGPGPDHDGRGNTRPGGVVPRENGDTRPGGNRPS
WRERHAEAIAAAERRSTDIAPPTSRSPGMEDENFVPGADDESLEDSSLYGRAAIERILGG
MLIDEHAHGTDL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtgactaccgccctgtaccgtcgctatcgcccggagacctttcaggatgtcatcggtcag
gaacacgtgaccgagcccctgatgaccgcgctgcgcaagaacagggtcaatcacgcctat
ctcttctccggtccgcgcggctgcggtaagaccacgtccgcgcgcatcctggcccgctgc
ctcaactgcgcggaagggcccacggccacaccgtgcggtcactgcgagtcctgccaggat
ctggcccgggacggtgccggctcactggacgtcatcgagatggacgcggcctcccacggc
ggcgtggatcatgcccgtgacctgcgggaacgcgccacgttcgcccccgtccgggaccgc
tacaagatcttcatcatcgacgaggcccacatggtcacgcgggagggcttcaacgccctg
ctgaagatcgtggaggaaccgccggagcacgtgaagttcatcttcgccaccaccgagccc
tccaaggtgctcaccaccatccgctcccgcacgcaccactaccccttccgcctcgttccc
ccggaaccgctcatgcgctacctcgagcagctgtgccaggaggagggcgtcaccaccgaa
ccgggcgtcctgtccctcgtggtgcgcgccggcggcggctcggtgcgtgattcgctctcc
gtcctggatcagctcatggccggctccgacgacggcggcatcacctacgatctcgcggtc
gccctgctgggctacacgcacgcggccctgctcgacgacgtcgtggacgccttcgccgcc
ggcgacgccgccacggtcttcgcgtccgtggaccgcgtcatccaaaccgggcaggacccc
cgccgtttcgtggaggacctgctcgaacgcttccgcgacctggtggtggtcaacgcggtc
cccgattccgccgcgaacatcctgcacgggatgcccacggaccagatcaaccggttgcgg
aaccaggccacccagctgggcgcggccgagctctcccgctccgcggacatcaccaacgag
gccctcaacgagatgaccggggccacctccccgcagttgcacctggaactgctgtgcgcc
cgcatcctactgccctcggcggaccacacaacgcggggcatcacgtcccgggtggaccgt
ttggaacgccgcctgagcattcctcggggcaccggaattcgtacgacggcgcacgacgcc
gcgtcgtcgtcccccgcggtggaaccgaccgcacgcggaagccaggagcccagatctccg
gaacaatccggcaccgccgcgccggcacccgcgtcgcacgacgcccccgcaccggaatcc
gccggggtaccttccccgatgccccccgcgctcgacgacgccgcaacggactccgttgcc
ccgtcgcagcccgtgcgcccggacgggtctgccgcggacggcgcggacggttccgcaacg
ggtcgccccgcagaggagaccccggacgtccaggaacccacggacccgcaggactattcc
gaacagcccgagggcagcagccaccccgccgctgcggaccccgttccggaagacgagcgc
ggccccgatgcccagcacccgcccgcggacggcacgaccgacacccgctcccccgcggca
caggacgcgggggccgatgtctcggcacgcatgcagcaacgggagacgtcgaaccagtac
gggtcccagcggcctgacgacgccgcatcccgccagtacgcgcagggggagcctcgccgt
gacgtcgcgccacacgatgaccaccagccgcaagccccgcaggcgtccgaggagcaggcc
gccccgagcgatgtcaccagcggtgaactggaactgctgcgttcctcgtggcccgagatc
gtgtccgcgctcgcggagatccgccgcgtggcctgggccatcaccgtgcgaggaacgccc
atctcgttcgagaaccgcactctacggatcgcgttcgagaacgacggcgacctcctgaac
ttcccccgcttcgaggcggacgtccgtaatgccatccagagcgtggtggggctggattgt
gcagtggaagcagtgcgccccggtgacacgcgcggccggcaggacaccccgggtgcgggt
ggtccgccgtcgaacgcgggccgtggcaccgggcccggtcccgggcgggacgccggcggt
ggacagggttaccggggagatcgccccgcgccccggggcggcgggccccagaatgctcag
ggatcccgacaggatcgcggatcgcagcaggaccggagttatcaacgcgacgattcctcc
tcggagcacggccaacagtacggccccggaccccgtcagggctcggactcgcatgacggc
gctgatgccgggtacggacccggctcacggcgagacaccggtgcatctcgcggcgacgga
cccaccgggcgggataccaggctgaacgcctcgagccgggccggatcctccgaccaaccg
gactatttccgcgagccggagggcttcggggtcaatcgtcgtcggggcaatcctcccgcg
cccgaccgtgaaccgacaccggaacgcgagtcgcggtccatgcccgattccgcctctcgt
tccacgtccggcactgaccggtcctccgtgcccgcttcctcgtcgcactcggcgcccgca
tccgccccggacgacgacgaacccgtcacctcgtggtccgtggcctccattccccaaccg
ggtttcgccgcaccgagcggcggggattccacgtcgaaaaccgccgatgcggcgcccacg
cgtgatgattcggaccagaatccggacacgtccgatagctccgtgggcgactcctccagg
gacgatgcccaccgagcgacggattccccggcggacgaccgcgctggcaccggcgattcc
acctcggttccgtctcgtgagggcttgggcagtgccagtgactccgcggacgtcggcgcg
acctcgtggacccctggtgtccccgcgtcggatggccccgggtctgatgttcccgcttcc
gatgactccgcggcgttcgagtcccacgatcccggggccgcttccggcgggcccgatctg
tccatgcgtgacggttccatgcgggatggttccgtgcgcgacggctccgtgcccgaggac
cccgcatccggtgctccttccttccgtgccccgcagccgcgagatcgcggcccggagtac
tggagcccagaggaaccgccgcccccaccggaggatgaccccccggcggacatgtacgac
gaacccgtgccccgagcgccgtcgcccgcgagggatcgtagggcccagggcgggaacggc
cccggcggcgacaacccggcgggccccggtcccgaccacgacgggcgcgggaacacccgc
cccggcggcgtcgtccctcgcgagaacggcgacacccgccccggtgggaaccgcccgagc
tggcgagagcgccacgcggaagcgattgccgcggcggaacggcgctccaccgacatcgcg
cccccgacctcgcgcagccccggcatggaggacgagaacttcgtcccgggcgcggacgac
gaatccctcgaggactcgtccctgtacgggcgggcggccatcgagcgcatcctgggcggc
atgctcatcgacgagcacgcccacggaacggatctgtga
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