Kocuria marina subsp. indica: KocCE7_02270
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Entry
KocCE7_02270 CDS
T05866
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
kii
Kocuria marina subsp. indica
Pathway
kii02020
Two-component system
kii02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KocCE7_02270
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KocCE7_02270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kii03000
]
KocCE7_02270
Transcription factors [BR:
kii03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
KocCE7_02270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
MarR_2
HTH_24
GntR
Crp
HTH_29
MarR
Sigma70_r4
HTH_3
HTH_36
HTH_ParB
HTH_26
wHTH-PRTase_assc
TrmB
HTH_IclR
HTH_23
CNBH_CNNM2_C
YfeC-like
VapB_antitoxin
HTH_11
DUF1670
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
QBJ20809
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Position
complement(519140..519817)
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AA seq
225 aa
AA seq
DB search
MDTDVLRRAPLFASLDDEAFAALTEEITEVNLSRGATLFYEGDPGDQLYFIVSGKMKLGR
TASDGRENLVAVMGPGEIFGEMALFDPSPRSTSATAVSETRLDGLKHENLRKVIQRSPEV
SAQLLQALARRLRRTNENLADLVFSDVPGRVAKALLDLADRFGRPATDGILVAHELTQEE
LAQLVGASRETVNKALAEFVQRGWIRLEARAVVILDLQRLKQRSR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ttggatacagacgtcctacgccgcgctccgctgttcgcttccttggacgatgaggcgttc
gccgctctgaccgaggagatcaccgaggtgaacctctcccgcggtgccaccctgttctac
gagggtgatccgggggaccagctctacttcatcgtctccggcaagatgaagcttgggcgc
accgcgagcgacggtcgcgagaacctcgtggccgtcatgggtcccggtgagatcttcggc
gagatggccctgttcgaccccagcccccgctcgacctccgcgaccgccgtgtccgagacc
cgcctggacgggctcaagcacgagaacctgcgcaaggtcatccagcgctcccccgaggtc
tccgcgcagctgctgcaggcgctcgcccggcgcctgcgccgcaccaacgagaacctcgcg
gacctagtgttctcggacgtccccggccgcgtggccaaggccctgctggacctcgcggac
cggttcggccgccccgccacggacggcatcctggtggcgcacgagctcacccaggaggaa
ctcgcccagctcgtgggtgcctcccgcgagaccgtgaacaaggccctggccgagttcgtc
cagcgcggttggatccgcctcgaggcgcgtgccgtggtcatcctggacctgcagcgcctc
aagcagcgctcccgctga
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