Kocuria marina subsp. indica: KocCE7_03300
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Entry
KocCE7_03300 CDS
T05866
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kii
Kocuria marina subsp. indica
Pathway
kii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KocCE7_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kii03021
]
KocCE7_03300
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_03300
Enzymes [BR:
kii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KocCE7_03300
Transcription machinery [BR:
kii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KocCE7_03300
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KocCE7_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QBJ20979
LinkDB
All DBs
Position
730989..732008
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AA seq
339 aa
AA seq
DB search
MLIAQRPTLTEEAVAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRIDGVL
HEFSTVEGVKEDVTELILNIKKLSLSSEEDEPVTAWLRKQGPGEVTAADISAPAGVEVHN
PDLHIATLNSKGQLEIELTIERGRGYVSASQNKSGDAEVGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDKLILDVETKEAISPRDAVASAGTTLVELFGLARELNSAAEGIEIGPSPTD
AAAAADMALPIEDLELSVRSYNCLKREGIHSVGELVGRSEADLMDIRNFGAKSIDEVKEK
LGELGLALKDSPPGYDLAAHAASLEDEDENNNPFDVDLD
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccaccctcacggaagaggctgtggccgagaaccgttcccgg
ttcgtgatcgaaccgctggaaccgggtttcggttacaccctcggtaactccctgcgccgt
acgctcctgtcctccatccccggggcctccgtgaccagcatccgcatcgacggtgtgctg
cacgagttctccaccgtggagggtgtcaaagaggacgtcaccgagctcattctcaacatc
aagaaactctccctgtcctccgaggaggacgagcctgtcaccgcgtggctgcgcaagcag
ggcccgggcgaggtcaccgcagcggacatctccgccccggccggtgtcgaggtccacaac
cccgatctgcacatcgcgaccttgaactccaagggccagctcgagatcgagctgaccatc
gagcgcgggcgcggttacgtctcggcgtcgcagaacaagtcgggtgacgcggaagtcggt
cggatccccgtggattccatctactcccccgtcctgaaggtgaccttccgcgtggaggcc
acccgtgtggaacagcgcaccgacttcgacaagctcatcctggacgtcgagaccaaggaa
gccatctccccgcgtgacgcggtggcttcggcgggcaccacgctggtcgagctgttcggc
ctggcgcgcgagctgaactcggctgccgagggcatcgagatcgggccttcgcccacggac
gccgcggctgccgcggacatggcgctgcccatcgaggacctcgagctgtccgtgcgttcg
tacaactgcctcaagcgcgagggcatccacagcgtgggtgaactcgtgggccgctccgaa
gcggacctcatggacatccgcaacttcggtgccaagtccatcgatgaagtcaaggagaag
ctcggtgagctcggtctggccctgaaggattcccctccgggttacgacctcgccgcccac
gcggcgtcgcttgaggacgaggacgagaacaacaacccgttcgacgtcgatctcgactga
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