Kocuria marina subsp. indica: KocCE7_05025
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Entry
KocCE7_05025 CDS
T05866
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
kii
Kocuria marina subsp. indica
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_05025
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KocCE7_05025
Archaeal homologous recombinant proteins
KocCE7_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QBJ21267
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All DBs
Position
1117114..1118337
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AA seq
407 aa
AA seq
DB search
MLILHTSDWHLGRTFHGVDILDIQAQAMAEIVEWVRHHGVSAVLVSGDVYDRAQPRTEVV
ELLSTTLAQIREAGAYVILTSGNHDSPARLGFGSGIMSHGGVHLLTRVPDAHVPVLLSQS
TDSTITVARATAPPAPDPRGATLSGAFTVAVYGIPYIEPRAAALSLDCAPTHQAVLGTVM
ERIDADRKERGDIPSVVMAHAFVTGAQPTDSERVVDSGGLGTVPAEVFARHDYTALGHIH
RRQRVADAVRYSGSPVAYSFSEAGHPKGAWLVDVQETGVREVTGLDHAVRMDLACLRGTL
DELLRDPAHTSAEGAWCQVVLTDRDRPASAMDRIRTRFPRTVELRWEPEGGRTLTQQAYS
ARVAEAAGAEELCAQFYDHVRHRGLSGPEQDEIADAVAAARSRGVEQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcttgcacacctccgactggcacctggggcgtaccttccacggcgtcgacatc
ctggacatccaggcgcaggccatggccgagatcgtcgagtgggtgcggcaccacggtgtc
tccgcggtcctggtctcgggggacgtgtacgaccgcgcccagccccgcacggaggtggtg
gagctgctcagcaccaccctggcgcagatccgcgaggcgggcgcgtacgtgatactcacg
agcggcaaccacgactccccggcgcggttgggtttcggctccggcatcatgtcccacggc
ggcgtccacctgttgacccgcgtgccggacgcccacgtcccggtcctgctctcgcagtcg
acggactccacgatcacggtcgcccgggcgacggcgccgcccgcccccgacccgcgcggt
gccaccctgtcgggggcttttacggtggccgtgtacggcatcccgtacatcgaaccgcgc
gcggccgcgctgtcgctcgactgtgcacccacgcaccaggccgtgctgggcacagtgatg
gagcgcatcgatgcggacaggaaagaacgaggcgacatcccgtccgtcgtcatggcgcac
gcgttcgtgacgggggcgcaacccacggattcggagcgcgtcgtcgattccgggggcctc
ggcaccgtcccggcggaggtcttcgcccgtcatgactacacggcgctcggccacatccac
cgccggcagcgagtcgcggacgccgtgcgctacagcggctcgcccgtggcctattccttc
tccgaggccggacaccccaagggagcgtggctcgtggacgtccaggagaccggggtccgt
gaggtcaccggcttggaccacgccgtgcgcatggatctggcgtgcctgcgggggacactc
gacgagttgctacgggatccggcgcacacctcggcggagggtgcctggtgtcaggtggtc
ctcacggatcgtgaccgcccggcatccgcgatggatcggatcaggacgcggttcccccgc
acggtggaactgcgctgggaacccgagggcggccggactctgacccagcaggcgtacagc
gcgcgggtcgcggaagccgccggtgccgaggagctgtgcgcccagttctacgaccacgtg
cggcaccgggggctgtccgggccggaacaggacgagatcgcggacgcggtggccgccgcg
cgcagcaggggagtggagcagtga
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