Kocuria marina subsp. indica: KocCE7_06740
Help
Entry
KocCE7_06740 CDS
T05866
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
kii
Kocuria marina subsp. indica
Pathway
kii03030
DNA replication
kii03430
Mismatch repair
kii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KocCE7_06740 (holA)
03430 Mismatch repair
KocCE7_06740 (holA)
03440 Homologous recombination
KocCE7_06740 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kii03032
]
KocCE7_06740 (holA)
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_06740 (holA)
Enzymes [BR:
kii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KocCE7_06740 (holA)
DNA replication proteins [BR:
kii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KocCE7_06740 (holA)
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KocCE7_06740 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QBJ21550
LinkDB
All DBs
Position
complement(1513706..1514707)
Genome browser
AA seq
333 aa
AA seq
DB search
MPPARRKAAAPPQTSWRDVTPQPLVLASGSDEYILQRIKDSLRDQTREQRGSCEVTDISA
ADYESGSLAVVTSPSLFDDPKLVCVHDLASMHENLLADGLSYVANPDPDVTVLWEHSGGN
RGKKLLDALKESALVLDCTPPKSDRDKTAFVLAEFRAHGKRIEPDAARALAAAVGTSTAE
LAAACAQLIADGPLTVDHDLVEKYYGGRVEVTAFRVADAAVAGNADQALKLWRQAVDVGV
DPVPMVAALGSKMRLIALTAGSRGGAGALARDVGAAPWQVERAQNEARRFTAGDVAAALQ
AVAEADAQVKGASRSPYFAVERAITVIATSGHH
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagcccgtcgcaaggccgccgcgccgccgcagacctcgtggcgggacgtcacc
ccgcagccgctcgtgctggcctccggctccgacgagtacatcctgcagcgcatcaaggac
tccctgcgggaccagacccgggagcagcgagggtcgtgcgaggtcacggacatctccgcc
gccgactacgagagcgggagcttggccgtggtcacgagcccctccctgttcgacgacccc
aaactcgtgtgcgtccacgacctcgcgagcatgcacgagaacctcctcgcggacggcctg
tcgtacgtggccaacccggacccggacgtgaccgtgctgtgggagcactccgggggtaac
cgcggcaagaaactactggacgctctcaaggagtcggcgctcgtcctcgattgcacgccg
cccaaatcggaccgcgacaagacggccttcgtcctagccgagttccgcgcgcacggcaaa
cgcatcgagccggacgccgcccgcgccctcgccgcggccgtgggcacgagcaccgcggag
ctcgccgccgcgtgcgcgcagttgatcgcggacggcccgctcacggtggatcacgacctc
gtggagaagtactacggcgggcgcgtggaggtcaccgcgttccgcgtcgcggacgccgcg
gtggccggtaacgcggatcaggccctgaagctgtggcggcaagccgtggacgtgggagtg
gacccggtccccatggtcgccgcgctgggctccaagatgcggttgatcgcgctgaccgca
ggatcccgcgggggagcgggagcacttgcgcgggacgtgggcgcggcgccgtggcaagtg
gagcgcgcgcagaacgaggcccgccggttcaccgccggggacgtggccgccgccctgcag
gccgtggccgaggccgacgcccaggtcaagggtgcgtcccggtccccgtacttcgcggtg
gagcgggcgatcaccgtgatcgcgacgtccggtcaccactga
DBGET
integrated database retrieval system
