Kocuria marina subsp. indica: KocCE7_07100
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Entry
KocCE7_07100 CDS
T05866
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
kii
Kocuria marina subsp. indica
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
kii03051
]
KocCE7_07100 (pafA)
Enzymes [BR:
kii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
KocCE7_07100 (pafA)
Proteasome [BR:
kii03051
]
Prokaryotic proteasome
Bacterial regulatory particles
KocCE7_07100 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QBJ21608
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All DBs
Position
complement(1600002..1601411)
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AA seq
469 aa
AA seq
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MERRIYGIETEFGLIHSAPQGRPLGADETARRLFAPVLAWGRASNVFLPNGGRLYLDVGS
HPEYATAEAATLHDVVAQDAAGERIVDDLRAQLQESLDAEGVGGTVHLFKNNADSAGNSF
GSHENYMIARRTEFSRLVQHLLPLLVTRQILVGAGRVHPDGPPPFGSLALGDGRPGYSFS
QRADHVWEGSSSATTRSRPMINTRDEPHADAERYRRLHVITGDSSMSQTTTALKIGITDA
VLRMIEAGQILPDRTLADPAAALRQVSHDLTGLAPLELAAGGYRSAIELQREYLEEVTRF
VQRHGAHHDRLDWVVGLWDRGLRAVEEQDSSLVDRELDWAIKKKLLDSYASAHGMDWSHP
RMAQLDLAYHDTSARHGLFHMLERRGAVETFVAPQDVERAVVEGPPTRARMRGRFVAAAH
DAGVSTTVDWVHLKLNGEHQQSTVMCKDPFATTQPDVEELIAEITSGRA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtggaacggcggatctacgggatcgagaccgagttcggcctgatccacagcgcaccgcag
ggccgtcccctgggtgcggacgagacggcgcggcggctgttcgcaccggtgctcgcgtgg
gggcgggcctccaacgtgttcctgcctaacggcgggcgcctgtacctggacgtgggctcc
caccccgagtacgcgacggccgaggccgcaaccctgcacgacgtcgtcgcccaggacgcc
gccggcgaacggatcgtggacgacctgcgcgctcagctgcaggagagcctggacgccgag
ggcgtgggcggcacggtgcacctcttcaagaacaacgcggactccgccggcaactcgttc
ggctcgcacgagaactacatgattgcccgccgcacggagttctcccggctggtccagcac
ctgctgccgctactggtgacgcggcagatcctcgtgggcgcgggtcgggtgcacccggac
gggccgccgcccttcggctccctggccctgggggacgggcgccccggctactcgttctcc
cagcgggcggaccacgtgtgggaagggtcgtcctcggccaccacccgttcccgccccatg
atcaacacccgggacgaaccgcacgcggacgccgagcgctaccgccggctgcacgtcatc
acgggcgactcgtccatgtcccagaccaccacggcgctgaagatcggtatcacggacgcg
gtgctgcgcatgatcgaggcgggccagatcctgccggaccgcacgctcgcggacccggct
gccgccctgcggcaggtctcccacgacctcaccggtttggcaccgctggagctggccgcg
gggggctaccgctcggcgatcgaactgcagcgcgagtaccttgaggaagtcacccggttc
gtgcagcgccacggcgcgcaccacgaccgcctcgactgggtcgtcgggctgtgggaccgt
gggctgcgcgccgtcgaggagcaggacagctcgctggtggaccgcgagctggactgggcc
atcaagaagaagctgctggactcctacgcgagcgcccacgggatggactggtcccacccc
cgcatggcgcagttggacctcgcttaccacgacacctccgcgcgccacggacttttccat
atgctggagcgccgcggtgccgtggagacgttcgtggccccgcaggacgtcgagcgcgcc
gtcgtcgaaggccctcccacccgggcgcggatgcgcgggcggttcgtggccgcggcccac
gacgccggggtcagcaccaccgtggactgggtgcacctaaagctcaacggggagcatcag
cagagcacggtcatgtgcaaggaccccttcgccaccacccagccggacgtcgaggagctg
atcgcagagatcacctccggacgcgcctga
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