KEGG   Kocuria marina subsp. indica: KocCE7_07540
Entry
KocCE7_07540      CDS       T05866                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
kii  Kocuria marina subsp. indica
Brite
KEGG Orthology (KO) [BR:kii00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    KocCE7_07540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kii03021]
    KocCE7_07540
Transcription machinery [BR:kii03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KocCE7_07540
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 CDC27
Other DBs
NCBI-ProteinID: QBJ22651
LinkDB
Position
complement(1692465..1694105)
AA seq 546 aa
MSNERFSVSPAASKTASASQASTEQTDPAETTSQAGTGGASTSGAAKKPAVKRAAAAKKT
VARKSTAAKKTASATRGTAAASSQTTAATSDAGASNESDTAAPAAKKTATRKTAAKKSAA
TKTAATKSTTRTKTAADSAEGTAKSAGTRKTTKTAAKPAAKAPAGGRGRKKADPVEEALA
EDELVPEDTPEDLEEEDTQESQQASVEESAPLMKGRQDKSARGFVLTNNDDDDAPAQQVV
VAGATADPVKDYLKQIGKVALLNAEQEVDLALRIEAGLYAEHKFADEQDSMDADTRRAYR
WVIHDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGFK
FSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELANE
LDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHS
VLDTLSEREAGVVAMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQV
LRDYLD
NT seq 1641 nt   +upstreamnt  +downstreamnt
ctgtccaacgaaaggttctccgtgtcaccagctgccagcaagaccgcgtccgcttctcag
gcctccacggagcagacggaccccgctgagaccacttctcaggcaggcacgggcggcgct
agcacgagtggcgctgccaagaagcccgccgtgaagagggccgccgcggccaagaagact
gtggcgcgcaagagcaccgccgctaagaagaccgcttccgccacgcgggggaccgccgcg
gcgtcgtcgcagaccaccgctgccacatcggacgcgggggcgtcgaacgagtcagacacc
gccgcccccgcggcgaagaagaccgccacccggaagaccgccgccaagaagtcggccgcg
accaagaccgcggcgaccaagtccacgacccgcaccaagaccgccgcggactccgcggag
ggcaccgccaagtccgcgggcacccgcaagaccaccaaaaccgccgcgaagcccgccgcc
aaggcccccgcgggcggacgcggtcggaagaaggcggatcccgttgaggaggcgctcgcc
gaggacgaattggtgcccgaggacaccccggaggacctcgaggaggaggacacccaggag
tcccagcaggcctcagtggaggaatcggccccgctcatgaagggccgccaggacaagagt
gcgcgcggcttcgtgctgaccaacaacgacgacgacgacgctcccgctcagcaggtggtc
gtcgccggtgccaccgcggaccccgtcaaggactacctcaagcagatcggaaaggtcgcg
ctgctcaacgcggagcaggaggtggacctggccctgcgcatcgaggccgggctgtacgcc
gagcacaagttcgcggacgaacaggactccatggacgcggacacccgccgcgcctaccgc
tgggtgatccacgacggccgccgcgccaagaaccacctgctcgaggccaacctgcgcctc
gtggtgtccctggccaagcgctacacgggccgcggcatgctgttcctggacctgattcag
gagggcaacctgggcctgatccgcgcggtcgagaagttcgactacaccaagggcttcaag
ttctccacgtacgccacgtggtggatccgccaggccatcactcgcgccatggcggaccag
gcccgcaccatccgcatcccggtgcacatggtcgaggtcatcaacaagctggcccgcgtg
cagcgccagatgctgcaggacctggggcgcgaacccaccccggaggagctcgccaacgag
ctcgacatgaccccggagaaggtcgtggaggtccagaagtacggtcgcgagcccatttcg
ttgcacacgccgctcggtgaggacggtgactccgagttcggcgacctgatcgaggattcc
gaggccgtggtccccgcggacgccgtgtccttcacgctgctgcaggagcagttgcactcg
gtgctggacacgctctccgaacgcgaggccggcgtggtggccatgcgcttcgggctcacg
gacggtcagcccaagaccctggacgaaatcgggaaggtctacggcgtcacccgtgagcgg
attcgccagatagagtccaagaccatgtccaagctgcgtcacccgtcccgctcgcaggtg
ctgcgggactacctggactga

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