Kocuria marina subsp. indica: KocCE7_07745
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Entry
KocCE7_07745 CDS
T05866
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kii
Kocuria marina subsp. indica
Pathway
kii03030
DNA replication
kii03430
Mismatch repair
kii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KocCE7_07745
03430 Mismatch repair
KocCE7_07745
03440 Homologous recombination
KocCE7_07745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kii03032
]
KocCE7_07745
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_07745
Enzymes [BR:
kii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KocCE7_07745
DNA replication proteins [BR:
kii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KocCE7_07745
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KocCE7_07745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QBJ21715
LinkDB
All DBs
Position
complement(1736431..1739985)
Genome browser
AA seq
1184 aa
AA seq
DB search
MTSATGKKGFTHLHVHTEYSMLDGAARLTDLFEECHRLGMDSLATTDHGFVFGAFDFWNK
ARAAGIKPIIGVEAYLTPGTARQDRSRVKFADGGRDDVSGAGAYTHMTLLAQTSEGMQNL
FRASTKASLEGQLYKPRMDRELLNQYGKGLIATTGCPSGEVQTRLRLGQYDQAVQAAAEF
RDIFGAENFYCELMDHGLGIEKRVTQDLLKLAKELNLPLVATNDLHYTHAEDAKSHAALL
CVQSGSTLQDPKRFKFDADEFYLKSPEQMRELFRDFPEACDNTLEIAERCEVDFDTSANY
MPRFPTPEGEDETSWFIKEVEKGLHYRFPGGIPDDVREQAEYEKKIIIQMGFPGYFLVVA
DFINWSKDNGIRVGPGRGSGAGSMVAYAMRITELNPLQHGLIFERFLNPDRVSMPDFDVD
FDDRRRSEVIHYVTEKYGDERVAMIVTYGTIKAKQALKDSSRVLGYPFSMGERLTKAMPP
DVMGKGISLQDVYDQEAKRYDEAGELREILADDPESMKVFETAQGLEGLKRQWGVHAAGV
IMSSDPLIDIIPLMRREQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDALENITLN
RDGFVLDLEHLPIDDAGSYDLLARGDTLGVFQLDGGPMRQLLKLMRPDNFEDISATIALY
RPGPMGANSHTNYALRKNGAQEITPIHPELAEPLSEILGTTYGLIVYQEQVMAIAQKVAG
YSLGQADILRRAMGKKKKAELDKQYQGFHQGMIDRGYSEDAIKALWDILLPFSDYAFNKA
HSAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKLAMYLTECRHMGITVLPPDVNES
ELNFTPVGTDIRFGMGAVRNVGSNVVQAMVDARTEQGKFTSFTDFLAKVPAVVCNKRTIE
SMIKAGAFDQLGHTRRSLVMCHEQAVEDVVAQKKKEDNGEFTFDIFAMGGADDAEQETFS
VEVPEVPEWERKDLLAFEREMLGLYVSDHPLRGLDDALGQYTDTAIASLLTEENTRPDGA
VITVGGMITSLSRRIAKSSGNAYARVELEDRSGSIEIMFFGKAYAPIAGVLAEDLICVIK
GRMQRRDDGSISISAQELTVPELSVDGSSGPVCVALPEHRATEAVIRRIGEVLRNHKGDS
EVRIHLDTHRSVQVMRLGPEYRVNPSPALFGDLKVLLGPACLEA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcggcgaccggcaaaaaaggcttcacccatctccacgtgcacaccgagtactcc
atgttggacggtgccgcgcgcctgaccgacctcttcgaggaatgccaccggttgggcatg
gactccctggccaccacggaccacggctttgtcttcggggcgttcgacttctggaacaag
gcgcgcgccgcggggatcaagccgatcatcggtgtggaggcctatctgaccccgggcacc
gcgcggcaggaccgttcccgcgtgaagttcgcggacggcgggcgcgacgacgtctcgggc
gccggtgcctacacccacatgaccctgctcgcgcagacgagcgagggcatgcagaacctg
ttccgcgcgtccaccaaggcgtcgctcgagggtcagctgtacaagccgcgtatggaccgg
gaactgctcaaccagtacggcaagggtctgatcgccaccacgggctgcccgtccggtgag
gtgcagacccgcttgcggttgggtcagtacgaccaggccgtgcaggcggccgccgagttc
cgggacatcttcggcgcagagaacttctactgcgaactcatggaccacgggctcgggatc
gagaagcgggtcacgcaggacctgctcaagctcgccaaagagctcaacctgccgctcgtg
gccaccaacgacctgcactacacgcacgcggaggacgccaaatcccatgccgcgttgctg
tgcgtgcagtccggttccacgttgcaggaccccaagcggttcaagttcgacgcggacgag
ttctacctcaaatccccggaacagatgcgcgagctcttccgggacttcccggaggcgtgc
gacaacaccctggagatcgccgagcgctgcgaggtggatttcgacacctccgcgaactac
atgccgcgtttccccaccccggagggcgaggacgagacctcgtggttcatcaaggaggtc
gagaaagggctgcactaccgcttccccgggggcatcccggacgacgtccgcgagcaggcc
gagtacgagaagaagatcatcatccagatgggcttccccggttacttcctggtggtcgcg
gacttcatcaactggtccaaggacaacgggatccgcgtgggtccgggccgtggttccggt
gcggggtccatggtcgcgtacgccatgcgcatcaccgagctcaacccgctgcagcacggg
ctgatcttcgagcgcttcctcaacccggaccgcgtgtccatgcccgacttcgacgtcgac
ttcgatgatcgccgccgctccgaggtcatccactacgtgaccgagaagtacggcgacgag
cgcgtggccatgatcgtcacgtacggcaccatcaaggccaagcaggcgctcaaggactcc
tcccgcgtgctgggctacccgttctccatgggggagcggttgaccaaggccatgccgccg
gacgtcatgggcaagggcatttccctgcaggacgtctacgaccaggaggccaagcgctac
gacgaggcgggggagctgcgcgagatcctcgcggacgaccccgagtccatgaaggtcttc
gagaccgcccagggcctcgaggggctcaagcgccagtggggtgtgcacgcggccggtgtg
atcatgtcctcggacccgctgatcgacatcatcccgttgatgcgccgcgagcaggacggg
caggtcatcacccagttcgactaccccacgtgcgaggggctggggctgatcaagatggac
ttcctggggttgcgcaacctcacgatcatctcggatgccctcgagaacatcacgctcaac
cgggacgggttcgtcctggacctcgagcacctgccgatcgacgacgctggttcctacgac
ttgctcgcgcgcggtgacaccctcggggtgttccagttggacggcgggcccatgcgtcag
ctgctcaaactgatgcgccccgacaacttcgaggacatctccgcgaccatcgcgctgtac
cgccccgggcccatgggtgcgaactcgcacaccaactacgcgctgcgcaagaacggcgcg
caggagatcacgccgatccacccggagctcgcggaaccgctgtcggagatcctgggcacc
acgtacgggttgatcgtgtaccaggagcaggtcatggcgatcgcccagaaggtggccggc
tactccctgggtcaggcggacatcctacgccgcgccatgggcaagaagaagaaggcggag
ctggacaagcagtaccagggcttccaccaggggatgatcgaccgcgggtactccgaggac
gcgatcaaggcgctgtgggacatcctgctgccgttctcggactacgcgttcaacaaggcg
cactccgcggcctacgggctcgtgtcctactggacggcgtacctcaaggcgcactacccg
gccgagtacatggccgcgctgctcacctcggtcggtgacgacaaggacaagctcgccatg
tacctgaccgagtgccgccacatggggatcacggtgctgcccccggacgtcaacgagtcc
gaactgaacttcaccccggtgggcaccgacatccgcttcggcatgggcgcggtgcgcaac
gtggggtccaacgtggtgcaggccatggtggacgcgcgcaccgagcagggcaagttcacg
tccttcaccgatttcttggccaaggtcccggccgtggtgtgcaacaagcgcaccatcgag
tccatgatcaaggccggtgcgttcgaccagctgggtcacacgcgccgcagcttggtgatg
tgccacgagcaagccgtggaggacgtcgtcgcgcagaagaagaaggaggacaacggcgag
ttcacgttcgacatcttcgcgatgggcggcgccgacgacgccgagcaggagacgttctcc
gtggaggtcccggaggtccccgagtgggagcgcaaggacctgctggcgttcgagcgcgag
atgctcggtctctacgtctccgaccatcccctgcgcgggctcgacgacgccctgggccaa
tacacggacaccgcgatcgcctcgctgctcaccgaggagaacacccgtcccgacggtgcg
gtgattaccgtgggtgggatgatcacctccctgtcccgcaggatcgcgaagtcgtccggc
aacgcgtacgcgcgcgtcgagctggaggaccgctcgggatccatcgagatcatgttcttc
ggcaaggcatatgcgcccatcgccggggtccttgccgaggacctgatctgcgtgatcaag
ggccgtatgcagcgccgcgacgacggttccatctccatctccgcccaggaactcacggtg
cccgagctgagcgtggatggttcctcgggacccgtgtgcgtggccctgcccgagcaccgg
gccacggaggccgtgatccgccggatcggggaggtgctgcgcaatcacaagggggactcg
gaggtgcggatccacttggacacgcatcgcagcgtccaggtcatgcgcctgggccccgag
taccgggtcaacccgtcgccggccctgttcggtgacctcaaggtcctcctgggcccggcc
tgcctcgaggcgtga
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