Kocuria marina subsp. indica: KocCE7_09735
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Entry
KocCE7_09735 CDS
T05866
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kii
Kocuria marina subsp. indica
Pathway
kii03420
Nucleotide excision repair
kii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KocCE7_09735 (pcrA)
03430 Mismatch repair
KocCE7_09735 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_09735 (pcrA)
Enzymes [BR:
kii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KocCE7_09735 (pcrA)
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KocCE7_09735 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KocCE7_09735 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_30
Viral_helicase1
ResIII
Peptidase_M19
Motif
Other DBs
NCBI-ProteinID:
QBJ22037
LinkDB
All DBs
Position
complement(2168478..2170934)
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AA seq
818 aa
AA seq
DB search
MDFLSDNPLLSAASARSANAPDSDEFSQPTPASGAQLVEGLNDPQRAAVEHAGSPLLIVA
GAGSGKTRVLTHRIAYLLATGRARRGEILAITFTNKAAAEMRERIVDLVGESARSMWIST
FHSLCVRVLRREAKTLGLSTNFSIYDSADSLRLITQVAKQHELDPKRFAPKAIQHKISAL
KNELVDDETYLARASSSDPFESAVARVYRGYTQRLRAANAMDFDDLIGETVHMFRAFPQV
LEYYRRRFRHVLVDEYQDTNHAQYALVRELVGGGSENHPDDSGIPPAELTVVGDSDQSIY
AFRGADIRNITDFERDFPSARTILLEQNYRSTQNILSAANSVISQNADRRDKKLWTAEGD
GAPIIGYAAENEHEEARFIAEEIDTLQDEHGIRPGDVAVFYRTNAQSRSLEEILMRVGLP
YKVVGGTRFYERKEIKDAISYLRAIANPADDITVRRIINEPKRGIGDRAQGSIAALADRE
DISFSEAMHRLDEAPALATRSANAIKKFSQLMDDLAELAQGTSVTAVLEAVLEQSGYLEA
LRTSTDPQDESRVENLAELVAVVREFEKDHPDAGLGEFLEHVALVADADQIPTQPEPEGG
ASAQQIAEQVAQARSQGVVTLMTLHTAKGLEFPVVFLTGMEHGIFPHQRSFADASSMEEE
RRLAYVGITRARKRLYLTRAESRSMWGQSQFNPASPFLDEIPSRLIEWKREGASAAGGWG
SPVHDGFQARDPLRGSSWGAGAGSGASFRRLSPASAGRVQPQREIPSLSVGDTVEHKAFG
RGSVVAMEGSGDKTVAKVRFGAEEKRLLLRYAPMTKVS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggacttcctctctgacaatcccctcctgtccgcggcctcggcgcgctcggcgaacgcg
cccgactcggacgagttctcccagcccaccccggcatccggggctcagctcgtggaggga
ctgaacgacccccaacgcgccgccgtggagcatgcgggttccccgctgctcatcgtggcc
ggtgccggttccggcaagaccagggtcctcacgcaccggatcgcctacttgctggccacg
ggccgcgcccgccggggggagatcctcgcgatcacgttcacgaacaaggccgccgcggag
atgcgggagcggatcgtggatctcgtgggggagtccgcgcgctccatgtggatctccacg
ttccactcgctgtgcgtgcgggtcctacgccgcgaggccaagaccctggggctgtccacc
aacttctccatctacgactccgcggactccctgcggttgatcacccaggtggccaagcag
catgagttggaccccaagcggttcgcgcccaaggccatccagcacaagatctccgccctc
aagaacgagctcgtggacgacgagacctacctggcccgcgcgagttcctcggacccgttc
gagtccgccgtggcccgggtctaccggggctacacccagcggttgcgcgcggccaacgcc
atggacttcgacgacctcatcggcgagaccgtgcacatgttccgcgcgttccctcaggtg
ctcgagtactaccgacgccgcttccggcacgtgctcgtggacgagtaccaggacaccaac
cacgcccagtacgcgctcgtgcgggaactcgtgggaggcggttccgagaaccacccggat
gactccgggatcccgccggccgaactcacggtggtgggggactcggaccagtccatctac
gcgttccgcggcgcggacatccgcaacatcacggatttcgagcgggactttccctccgcg
cgcaccatcctgctggaacagaactaccgctccacgcagaacatcctctccgcggccaac
tccgtgatctcccagaacgcggaccgccgggacaagaaactgtggaccgcggaaggcgat
ggcgcccccatcatcgggtacgccgctgagaacgaacacgaagaggcccgcttcatcgcg
gaggagatcgacacgctgcaggacgaacacgggatccgccccggcgacgtcgccgtgttc
taccgcaccaacgcacaatcgcgctccctcgaggagatcctgatgcgcgtgggactgccc
tacaaggtggtgggcgggacccgcttctacgagcgcaaggagatcaaggacgccatatcc
tacctgcgcgcgatcgcgaaccccgcggacgacatcaccgtgcggcgcatcatcaacgag
cccaagcgagggatcggggaccgcgcccagggctcgatcgcggcgctcgccgaccgcgag
gacatctccttctccgaggccatgcaccgcttggacgaggcacccgccctggccactcgc
tcggcgaacgccatcaagaagttctcccagctcatggacgatctcgcggaactcgctcag
ggcacctcggtgaccgcggttctcgaggctgtactcgaacagtccgggtacctcgaggcc
ctgcgcacgtccaccgacccgcaggacgagtcccgtgtggagaacctcgcggaactcgtg
gccgtggtgcgcgagttcgagaaggaccacccggacgcgggcctcggggagttcctggaa
cacgtggccctcgtggcggacgcggaccagatccccacccagcccgaacccgagggcggc
gcgagtgcccagcagatcgcggagcaggtcgcgcaagcgcgttcccagggggtcgtgacg
ctcatgaccctgcacaccgccaaggggctcgagttcccggtcgtgttcctcacgggcatg
gagcacgggatcttcccgcaccagcgcagcttcgccgacgcctcgagcatggaggaggaa
cgccgcctcgcgtacgtggggatcacccgggcgcgcaaacggctgtacctcacacgcgcc
gagtcccgctccatgtgggggcagtcccaattcaatcccgcgagcccgttcctggacgag
atcccttcgcggttgatcgagtggaagcgcgagggtgccagtgccgcgggcggatggggt
tcgcccgtgcacgacggattccaggcccgcgatccgttgcgcggttcctcgtggggtgcg
ggcgccggatccggggcaagtttccgcaggctctcaccggcctccgccgggcgcgtgcag
ccccagcgggagattccttccctcagcgtgggagacacggtggagcacaaggcgttcggc
cgcggttccgtggtcgccatggagggctccggggacaagacggtcgccaaggtgcgcttc
ggtgcggaggagaagcggctcctgttgcgttacgcgcccatgaccaaggtctcgtaa
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