Kocuria marina subsp. indica: KocCE7_09840
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Entry
KocCE7_09840 CDS
T05866
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kii
Kocuria marina subsp. indica
Pathway
kii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KocCE7_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_09840
Enzymes [BR:
kii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KocCE7_09840
DNA repair and recombination proteins [BR:
kii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KocCE7_09840
Prokaryotic type
KocCE7_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBJ22697
LinkDB
All DBs
Position
2188303..2188956
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AA seq
217 aa
AA seq
DB search
MNEEWARALQSVEPQIRAVGEFLRAEHAEGHHTLPAGDHIFRALREPMSAVKVLIVGQDP
YPTPGHAMGLSFSVAPDVRPIPRSLQNIYKELHSDLGITPPAHGDLSSWAEQGVMLLNRV
LTVRAGFPASHRGKGWEAVTECAIRALGAREQPLVGILWGRDARGTKDWLGGAPTVESVH
PSPLSASRGFFGSRPFSRANELLQQQGAQPVSWELPA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggagtgggcccgtgccttgcagtccgtggagccgcagatccgggccgtgggc
gagttcctgcgcgccgaacacgccgagggccaccacaccctgcccgctggggaccacatc
ttccgcgcgcttcgcgagccgatgtccgcggtcaaggtgctgatcgtgggccaggacccc
taccccaccccgggccatgcgatgggcctctcgttctcggtagccccggacgtgcgcccg
atcccgcggtccctgcagaacatctacaaggaactgcactccgatctggggatcacgccg
cccgcgcacggggacctgtcctcgtgggccgagcagggcgtcatgctgctcaacagggtc
ctcacggtgcgcgcgggcttccccgcgtcccaccggggcaagggctgggaagcggtcacg
gagtgcgctatccgcgcgctcggggcgcgcgagcaacccctcgtcggcatcctgtggggt
cgcgacgcccgcggcaccaaggactggctgggtggggcgcccaccgtggaatcggtgcac
ccgtccccgttgtccgcgtcccgggggttcttcggttcccgcccgttctcccgcgccaat
gagctgctgcaacaacagggcgcccagcccgtctcgtgggaactgcccgcgtag
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