Kocuria marina subsp. indica: KocCE7_12175
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Entry
KocCE7_12175 CDS
T05866
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
kii
Kocuria marina subsp. indica
Pathway
kii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KocCE7_12175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kii03000
]
KocCE7_12175
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_12175
Enzymes [BR:
kii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KocCE7_12175
Transcription factors [BR:
kii03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KocCE7_12175
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KocCE7_12175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
QBJ22431
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Position
2710129..2711631
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AA seq
500 aa
AA seq
DB search
MPPQDSSFDERYRAVESRDGRFDGQFVTAVRTTGIYCRPSCPARTPHRENVRFYRTSAAA
HAAGYRACKRCVPEAVPGSPEWDLRGDVVGRAMRLITEGVVDREGVLGLARRVGYSTRHL
TRVLTEELGAGPLALARAHRAQTARALLTQTDLPVAETAFAAGFSSIRQCNEVIREVYDM
TPQQLRARSTSTGPSGHGAASEPGEMDLALSYREPLDVRGLFVWFAVHAVDGVEVGTPTS
YTRALSLPGGPAWLRVYERAGRLRLRTRVTDLADLPVLIARVRRLFDLDADPEAVAAALS
RVPVLRPLVEAAPGLRVAGSADPHETLIRTLIGQQISLAAARTVLGARARDMGEPAPSFA
TGIRYMFPTAAAIAEHGVQFLGGPAARVRAVLGAARALASGDLQLSPGDDATQQRAALLT
LPGVGPWTADHVRMRVTGDPDVFLIDDGAMRAGARRLGLPDTKPALVDWAGAAAPWRSYA
TTHLWGPLTPPASFSESVQS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgccccctcaagactcctcgttcgacgagcgctaccgggctgtcgagtcccgggacggg
cgcttcgacgggcagttcgtgaccgcggtgcgcaccaccgggatctactgccgcccgagc
tgccccgcgcgcacgccccaccgcgagaacgtgcgcttctaccgcacgagcgcggccgcc
cacgccgccgggtaccgcgcctgcaaacgctgtgtcccggaagccgtgccggggtccccg
gaatgggatctgcgcggggacgtggtggggcgcgccatgcggctcatcaccgagggggtc
gtggaccgcgagggcgtgctgggactcgcgcggcgcgtgggatattccacgcgccacctc
acccgcgtgctgaccgaggaactcggcgccggaccgctcgcgctcgcccgcgcccaccgg
gcccagacggcgcgcgccctattaacgcagacggacctgccggtcgcggagaccgcgttc
gccgcgggattctcgagcatccgacagtgcaacgaggtgatccgcgaggtgtacgacatg
accccgcagcaattgcgggcgcgcagcacgagcaccggcccctcgggacacggcgcggcg
agtgagccgggcgagatggacctcgcgttgagctatcgcgagcccctggacgtgcgcggg
ctgttcgtgtggttcgctgtccatgcggtggacggcgtggaggtcgggacccccacctcc
tacacccgcgcgctgagcctgcccggcggcccggcctggctgcgcgtgtacgagcgcgcg
gggcggttgcggttgcgcacgcgagtcacggatctcgcggacctgcccgtgctgatcgcc
cgggtgcgtcggctcttcgacctggacgccgatccggaggcagtggccgccgcgctgtcc
cgcgtcccggtgttgcgcccgctggtcgaggccgccccggggctgcgggtcgccggttcc
gcggacccgcacgagacgttgatccgcacgctcatcggtcagcagatctccctggccgcg
gcccgcaccgtgttgggtgcccgcgcgcgggacatgggagagcccgcgccctccttcgcc
acgggcatccggtacatgttcccgaccgcagcggccatcgccgagcacggcgtccagttc
ctgggcgggccggccgcgcgggtccgggcggtcctgggtgctgcccgcgcgctcgcctcg
ggtgatttgcagttgtcccccggcgacgacgccactcagcaacgcgccgcgctcctcacc
ctccccggggtggggccatggaccgcggaccacgtgcgcatgcgggtcaccggggacccg
gacgtgttcctgatcgacgacggggccatgcgcgccggtgcccgacggctcgggctcccg
gacaccaaacccgcactcgtggactgggcaggggccgctgccccatggcgcagttacgcc
accacccatctgtggggtccgctgacccctcccgcttccttctcggaaagtgtgcagtca
tga
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