Kocuria marina subsp. indica: KocCE7_12270
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Entry
KocCE7_12270 CDS
T05866
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
kii
Kocuria marina subsp. indica
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_12270
Enzymes [BR:
kii01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KocCE7_12270
DNA repair and recombination proteins [BR:
kii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KocCE7_12270
Prokaryotic type
KocCE7_12270
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5817_CT
Usp
Motif
Other DBs
NCBI-ProteinID:
QBJ22445
LinkDB
All DBs
Position
complement(2727219..2728544)
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AA seq
441 aa
AA seq
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MTTVVLFRDDLRVTDHPALHEAVSHGEPVVCLYVLDEESPGIRPLGGAAKWWLHHSLTSL
AADLAALGTPLTLRRGAAGEVVRDVVRETGADRVLWNRRYGGPERAVDAGLKDWAGENGV
EAHSYAGNLMFEPWAITTQAGDPYRVFTPFWRACTSGPPPREPYPAPSSVVPAEPTPASD
ALEDWGLLPTAPDWSAGLARTWTVGERAAHDRLDDFLDERLPTYTQDRDVPAKPATSGLS
PHLRWGEISPHTVWYRALSGAENPGKFLTELGWREYAWYNLYIHPDMATRPINPKFERFP
WPPLDDDALAAWQRGRTGIPLVDAGMHELWETGTMQNRVRMVTASLLAKNLLIDWRLGEQ
WFWDTLVDADPASNPHNWQWVAGSGTDAAPYFRIFNPETQQKKFDPDFVYVDRWNGRQEG
VESIVDLKASRAHALELFKTL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgtggtgctgttccgcgacgacctgcgggtcaccgaccaccccgccctgcac
gaggcggtgtctcacggtgagcctgtggtgtgcctctacgtgctggacgaggaatccccg
ggcatccggcccctcgggggtgcagcgaagtggtggctgcatcactccctcacgtcgctg
gcggcggatctcgccgccctggggacgcctctgaccctgcggcgaggggcggcgggggag
gtcgtgcgcgacgtcgtccgcgaaaccggtgcggaccgtgtgctgtggaaccggcgctac
ggcgggcccgagcgcgcggtggacgccgggctcaaggactgggctggggagaacggggtg
gaggcgcactcctacgccgggaacctgatgttcgaaccgtgggccatcaccacgcaggcc
ggtgacccctaccgagtgttcaccccgttctggcgcgcgtgcacgagcgggccgccgccg
cgtgaaccgtatccggcgccgtcgtccgtggtgcccgccgagcccacccctgcctccgac
gccctcgaggactgggggctcctacctaccgcgccggactggtcggcagggctggcccgc
acgtggaccgtgggcgagcgcgcggcccacgaccgcctcgacgacttcctcgacgagcgc
ctgcccacctacacgcaggaccgggacgtcccggcgaaaccggcgacgtcgggcctgtct
ccgcacctgcgctggggggagatcagcccgcacaccgtgtggtacagggcgctgtccggc
gcggagaacccggggaagttcctcaccgaactgggatggcgggagtacgcctggtacaac
ctctacatccacccggacatggcaacccgccccatcaaccccaaattcgagcgcttccca
tggcctccgctggacgacgacgcgctcgccgcgtggcagcgcgggcgcacggggatcccc
ctggtggacgcgggcatgcacgaactatgggagaccgggaccatgcagaaccgggtgcgc
atggtgaccgcgtctctattggccaagaacctgctgatcgactggcggctgggggagcag
tggttctgggacaccctcgtggacgcggaccccgcctcgaaccctcacaactggcagtgg
gtggccggttccgggaccgacgccgcgccctacttccggatcttcaaccccgagacccag
cagaagaagttcgacccggacttcgtgtacgtggaccgctggaacgggcggcaggagggc
gtggaatccatcgtggacctcaaggcttcccgcgcccacgccctggagctgttcaagacc
ctgtga
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