Kineobactrum salinum: G3T16_05195
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Entry
G3T16_05195 CDS
T06468
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kim
Kineobactrum salinum
Pathway
kim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3T16_05195 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kim03019
]
G3T16_05195 (pnp)
03016 Transfer RNA biogenesis [BR:
kim03016
]
G3T16_05195 (pnp)
Enzymes [BR:
kim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G3T16_05195 (pnp)
Messenger RNA biogenesis [BR:
kim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G3T16_05195 (pnp)
Transfer RNA biogenesis [BR:
kim03016
]
Prokaryotic type
tRNA degradation factors
G3T16_05195 (pnp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
KH_KhpA-B
SPATA25
DUF3016
Motif
Other DBs
NCBI-ProteinID:
QIB64877
UniProt:
A0A6C0U1L9
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All DBs
Position
complement(1223990..1226104)
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AA seq
704 aa
AA seq
DB search
MNPVTKTFQYGGHTVTLETGRIARQATGAVLVTVENTAVLVTVVAEKTAKEGMPFFPLGV
HYQEKTYSVGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVICTVMSAD
KHIDPDIPAMIGTSAALAISGCPFNGPIGGARVGFDEHNGYILNPTYEQLAGSKLNMVVA
GTADAVLMVESEAQELSEDQMLGAVLYGHQEMQVVIQAINELVAEAGKPRWDWEPAAVNQ
ELTAAVESQVKSELGEAYRITDKAERYGRVSEIRKACVEALAVEGGPSADEVKDVFKAVE
KNMVRKRILAGEPRIDGRDTRTVRAIACEVDVLPKVHGSALFTRGETQAIGAVTLGSTRD
AQIIDALEGERRDPFMLHYNFPPYSVGEAGRVGFTNRREVGHGRLARRGLAAVLPDEESF
PYTIRLVSEITESNGSSSMASVCVGSLAMMAAGVPLKAPVAGIAMGLVKDGNQFAVLTDI
LGDEDHLGDMDFKVAGTAAGVTALQMDIKIEGITEQIMDIALQQAQQARLHILGQMNVVL
AAPREVTSENAPSMVTLKVDADKIRDIIGKGGATIRAITEASGATVDIDDSGAVRVFGQD
QSARDKAVAMIEEITAEAEVGATYKGTVARIVDFGAFVNILPGKDGLVHISQIAHERVEN
VTDYLKEGQEVEVKVLDVDQRGRIKLSIKELLEDEIIAEPVTDE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccagtaacaaaaacatttcagtacggtggccacacagtcacgctggaaacggga
cgcattgccaggcaggcaacgggcgcggttctggtaaccgttgaaaataccgcggtcctg
gtgacagtagtggccgagaaaactgccaaggagggaatgccttttttcccgctgggcgta
cattaccaggaaaagacctactccgtgggcaagatccccggcggcttcttcaagcgcgag
ggccggcccagtgaaaaggaaaccctgacctcgcgcctgatcgaccgtcccatccggcct
ctgtttccgaacggtttcatgaacgaagtacaggtgatctgtacggtcatgtcggccgac
aagcatatcgatccggacattccggcgatgatcggcacctcggcggcgctggccatttcc
ggttgccccttcaacgggcctatcggtggtgcgcgggtcggctttgacgagcacaatggt
tatatcctcaacccgacctacgagcagcttgccggcagcaaactgaacatggtggttgca
ggcactgccgatgccgtgctgatggtggagtccgaggcacaggagctgtcggaagaccag
atgctgggcgccgttctgtacggtcaccaggaaatgcaggtcgtcatccaggccatcaat
gaactggtcgccgaggcaggcaagccgcgttgggattgggagccggccgccgttaaccag
gaattgaccgccgcggtggaaagccaggtcaagagcgagctgggcgaagcctaccggatc
actgacaaagccgagcgttacgggcgtgtcagcgaaatccgcaaggcctgtgtcgaggcc
ctcgcggtcgagggcggaccgtccgccgatgaggtcaaggacgtgttcaaggcggtcgag
aagaacatggtgcgcaagcgcatcctggccggcgagccgcgcatcgatggccgcgatacc
cgtaccgtgcgggccatcgcctgcgaggtggacgtgctgccgaaggtacacggttcggcg
ctgtttacccgcggcgaaacccaggccatcggcgcggtgaccttgggctccacccgcgac
gcgcagatcatcgacgcgctggaaggcgagcgccgcgacccattcatgctgcactacaac
ttcccgccctattccgtgggtgaggcgggacgtgtcggtttcaccaatcgccgtgaagtc
ggccatggccggttggcgcggcgcggtctggcggcggtactgcccgatgaagaatcgttc
ccctacaccatacgcctggtctcggagatcactgaatccaacggttccagctccatggct
tcggtctgcgttggctcgctggccatgatggccgcgggtgtgccgttgaaggcgccggtg
gccggtattgcgatgggcctggtcaaggacggcaaccagtttgccgtgctgaccgacatt
ctgggtgacgaggatcacctcggtgacatggacttcaaggtggccggcactgccgccggt
gtcaccgcgctgcaaatggatatcaagatcgaaggtatcaccgagcagatcatggacatc
gccctgcaacaggcacagcaggcccgcctgcatatcctggggcagatgaacgtggttctc
gcggcgcctcgcgaagtgacgtccgaaaatgcgcccagcatggtgacgctgaaggtggat
gcggacaagatccgtgacatcatcggcaagggtggcgccaccatccgcgccattaccgag
gcctctggcgcgactgtcgacattgacgacagcggtgcggtgcgggtctttggccaggac
cagagtgcccgtgacaaggccgtggcgatgatcgaagagatcaccgcagaggcagaggtc
ggtgcaacttacaaaggtaccgtcgcccgcatcgttgacttcggcgccttcgtcaatatc
ctgcccggcaaggatggcctggtgcacatttcccagatcgcccacgagcgggtggagaat
gtgaccgactatctgaaagaaggccaggaagtggaagtcaaggtcctggatgtcgatcaa
cgcggccgcatcaagctttccatcaaggaattgttggaagacgagatcatcgccgagccg
gtaaccgacgagtag
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