Kineobactrum salinum: G3T16_09890
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Entry
G3T16_09890 CDS
T06468
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kim
Kineobactrum salinum
Pathway
kim03030
DNA replication
kim03410
Base excision repair
kim03420
Nucleotide excision repair
kim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3T16_09890 (polA)
03410 Base excision repair
G3T16_09890 (polA)
03420 Nucleotide excision repair
G3T16_09890 (polA)
03440 Homologous recombination
G3T16_09890 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kim03032
]
G3T16_09890 (polA)
03400 DNA repair and recombination proteins [BR:
kim03400
]
G3T16_09890 (polA)
Enzymes [BR:
kim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3T16_09890 (polA)
DNA replication proteins [BR:
kim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G3T16_09890 (polA)
DNA repair and recombination proteins [BR:
kim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G3T16_09890 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3T16_09890 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QIB65675
UniProt:
A0A6C0U5J5
LinkDB
All DBs
Position
2285070..2287796
Genome browser
AA seq
908 aa
AA seq
DB search
MTNNAPVPIVLVDGSSYLYRAYHALPPLNNSKGEPTGAVKGVISMLRRLCKDYPESPVAV
VFDAKGKTFRDELFEQYKAHRPPMPDDLRAQVEPIHAIVRAMGLPLICEPGVEADDVIGT
LARQASSKGRPVVISTGDKDMAQLVDPNVTLVNTMTGTCMDEAGVLQKFGIPPALIIDLL
ALMGDKIDNIPGVPGVGEKTALALLQGLGRLDDIYAALDKVALLDFRGAKTMAAKLQAEK
ERAYLSYMLATIKTDVPLQECPDTLCNGVPDSEALQELYSRLEFRSWLEELLDSPGAAPS
VQPVPAELNWELLTTATDLERWLQRLASAELFAFDTETTSLNYMEAEIVGLSFAVSAGEA
AYVPLAHDYLGVPEQLDRDSVLAQLRPLLEDPNRAKLGQNLKYDASVLANHGITLRGICH
DTMLESYVLDSTATRHDMDSLALKYLGHRTIHFQDIAGKGAKQLTFNQIKLEEAGPYAAE
DADVTLRLHQTLWPRLQALSGPVSVYRDIEIPLVPVLSRIERTGALLSRELLQRHSAELG
QRLQALELEAYELAGQQFNLGSPKQLGEILFEILALPVLRKTPKGAPSTAEEVLAELALD
YPLPKVLLEHRGLSKLKSTYTDKLPEMINPRTGRIHTSYHQAVAATGRLSSADPNLQNIP
IRTEEGRRIRQAFIAPPGYRIVAADYSQIELRIMAHLSADEGLLAAFRSGQDVHRATAAE
VFGVELEQVSAEQRRKAKAINFGLIYGMSAFGLGRQLHLGRNEAQQYIDRYFERYPGVQQ
YMDRTRAAAREQGYVETLFGRRLYLPEINARNKMRAQAAERTAINAPMQGTAADIIKQAM
LTVDQWLQEGTVNARMVMQVHDELVLEVAEAEVAEVCSRLCELMSGAAELAVPLLVEAGS
GKNWDEAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaatgcccccgttccgatcgtgctggtagatgggtcgtcctacctgtaccgg
gcctatcatgctctgccgccactcaacaattccaaaggtgaacccaccggtgcggtgaag
ggtgtcatcagcatgctcaggcgactgtgcaaggactatcccgagagtccggtggccgtg
gtatttgacgccaagggcaagacctttcgcgatgaactgttcgagcagtacaaggcccac
cggccgcccatgccggatgacctgagggcgcaggtggaaccgattcacgccatcgtccgg
gcgatgggcctgccgctgatctgtgagcccggggtagaggccgatgatgtgatcggcaca
ctggcccgccaggccagcagcaagggccgcccggtggtgatctccaccggtgacaaggat
atggcgcaactggtggatccgaacgtcacgctggtcaataccatgaccggcacctgcatg
gatgaggcgggcgtgctgcagaagttcggcattccgccggcgctgattatcgatttgctg
gcgctgatgggcgacaagatcgataacattcccggggtacctggcgtcggggagaaaacg
gcactggccctgctgcaggggctggggaggctggacgatatctatgcggcgctggacaag
gtggcgctgctggattttcgcggcgccaaaaccatggcggccaaactgcaggccgaaaaa
gaacgcgcttatctttcctatatgctggccacgatcaagaccgatgtgccgctgcaggag
tgtccggatacgctgtgcaatggtgtgccggatagcgaagcgctgcaggaactgtactcc
cggctggagtttcgcagctggctggaggaactgctggacagcccgggagcagcaccgtcg
gtgcagccggttcccgcggaattgaactgggagttgctgactaccgccaccgacctggag
cgctggctacagcgcctggcgagcgccgaactgttcgcgttcgataccgagaccaccagc
ctgaattacatggaagccgaaatcgtcggcctgtcctttgccgttagcgccggtgaggct
gcctatgtgccgctggcccacgattacctgggcgtgcctgaacagcttgaccgggacagt
gtgctggcacagctcaggccgttgctggaggacccgaatcgtgccaagctcggccagaac
ctgaagtacgacgccagcgtactggccaaccacggcatcacgctgcgcggtatctgtcac
gacaccatgctcgagtcctatgtgcttgattcgaccgcgacccggcacgatatggacagc
ctggcgctgaaatacctgggtcacaggaccatccactttcaggatattgccggcaagggc
gccaaacaactgactttcaaccagatcaagctggaggaagccggtccctatgccgccgag
gatgccgacgtcaccctgcgcttgcaccagaccctgtggccccgcctgcaagctttgtcc
gggcccgtctcagtctatcgcgacatagagattcctctggttcccgtattgtcgcgtatt
gagcgcactggagcgctattgtcccgggagctgctgcagcggcacagcgccgaactgggg
cagcgcttgcaggcgctggaactggaggcctacgaactggcgggacagcagttcaatttg
ggttcgcccaagcagctgggtgaaatcctgttcgagatcctggcgctgccggtactgcgc
aagacccccaagggtgcgccatccacggctgaggaggtgctggccgagctggcgctggac
tatccgttgccgaaggtcctgctggagcaccgcggcctctccaagctgaagtccacctat
actgacaagctgccggagatgatcaacccgcgcaccgggcgcatccacacctcctatcac
caggcagtggctgcgaccggaaggctgtcctcggccgaccccaatctgcagaatattcca
atcagaaccgaggaaggacgccgtatccggcaggccttcatcgcgccgccgggctatcgg
atcgtggctgcggactactcccagatcgaattgcgcatcatggcgcacctgtccgctgat
gagggtctgctggcagccttccgctccggccaggatgttcaccgcgccaccgcggcggaa
gtgttcggggtcgaactggagcaggtctcggctgaacagcggcgcaaggccaaggccatc
aattttgggctgatctacggtatgtccgcgttcggtctgggccgccagttgcacctgggc
cgcaatgaggcccaacagtatatcgatcgctacttcgaacgctatcccggggtccaacag
tacatggatcgcacccgcgctgccgctcgtgaacagggttatgtggagaccctgttcggg
cgccggctgtacctgccagagatcaacgcccgcaacaagatgcgggcccaggctgccgag
cgcacggccatcaacgctcccatgcagggtacggcggcggacatcatcaagcaggccatg
cttacagtcgatcagtggctgcaggagggcacggtgaacgcccgcatggtcatgcaggtg
catgacgaactggtactggaagtggccgaagccgaggtggcggaggtctgtagccggctg
tgcgaactgatgtcaggggcggccgaactggcggtcccgctgctggtcgaagcggggtca
ggaaaaaattgggatgaagcgcactga
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