Kineobactrum salinum: G3T16_13085
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Entry
G3T16_13085 CDS
T06468
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kim
Kineobactrum salinum
Pathway
kim03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G3T16_13085 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kim03021
]
G3T16_13085 (rpoC)
03400 DNA repair and recombination proteins [BR:
kim03400
]
G3T16_13085 (rpoC)
Enzymes [BR:
kim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G3T16_13085 (rpoC)
Transcription machinery [BR:
kim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G3T16_13085 (rpoC)
DNA repair and recombination proteins [BR:
kim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G3T16_13085 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
QIB66202
UniProt:
A0A6C0U225
LinkDB
All DBs
Position
2977730..2981950
Genome browser
AA seq
1406 aa
AA seq
DB search
MKDLLNLLKSQGQSEEFDAIRIGLASPEMIRAWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVTDPGLTTLNPAQLLTDEEYYEAMEEFGDEFTAKM
GAEAVQDLMKQLDLEREISNLREEIPATNSETKIKKLSKRLKLMEAFAGSGNKPEWMVLN
ALPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFGKLEARGLATTIKAAKKMVEREPPEVWDILAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTIEAQLEA
RALMMSTNNILSPASGDPIIVPSQDVVLGLYYMTRSRVNAKGEGMIFANVSEVNRAYRGG
HVHLQARVKVRIHEVVQTEEGDRMERTFIADTTVGRALLWEIVPEGIGYEMVNQDMAKKA
ISRIINQCYRVVGLKATVIFADQLMYTGYEYSTRSGSSIGVNDFVIPEAKAELIARADRE
VKEIEDQYAAGLVTQGEKYNKVIDIWSRANDLVSKAMMDGLSKETVINRDGEEEDQASFN
SVYIYADSGARGSPAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEVDCGTDRGLLMTPVIDGGDIIESLGDRVL
GRIVAKDVIKPGSSEEIAITAGTMLDELWIKRLEEMGIDEVEVRSPITCETRHGICSTCY
GRDLARGHRVNMGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASRQTAQDNIQVMNEGSVR
LHNVKTVERKDGFLIAVSRSGELSILDKMGRERERYKLPYGAIIKVHDNAEVSAGDIVAN
WDPHTHPIITEVAGIARFSGMEEGITIKRQTDELTGLSNIEVLDLGERPAAGKDVRPAVS
LVDSNGDELCLAGTNVPAHYFLPAHALVAPENGANLEAGDVIARIPQEGSKTRDITGGLP
RVADLFEARKPKEPAILAEISGTVSFGKETKGKRRLVITPTDSTTLADGSDHYEALIPKW
RNMSVFEGEFVEKGEVVSEGPLSPHDILRLKDVKELAKYIVNEIQEVYRLQGVKINDKHI
EVIVRQMLRKVVITSSGDSSLIKGEQVEHVTFLEENERLLAEGMVPATAERELLGITKAS
LATESFISAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHAERKRTR
GGETEMSVSAQEIEAALTEALQDSNS
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttacttaatctactcaaatcccagggacagtcagaagagttcgatgcgatc
cgtatcggcctggcgtcgccggagatgattcgcgcgtggtcctttggcgaagtcaagaag
ccggagaccatcaactaccggactttcaaaccggagcgcgacggcctgttctgcgccaag
atctttggcccggtgaaggactatgagtgcctctgtggcaagtacaagcgcctcaaacac
cgtggtgtcatctgtgaaaaatgcggtgtcgaagtggcgctggccaaggtccgccgcgag
cgcatgggccatatcgaattggcgagtccagtggcgcatatctggttcctgaagtcgctg
ccctcgcgtatcggcctgttgctggacatgaccctgcgcgatatcgaacgggtactctat
ttcgaatcctatgtggtgaccgatccgggtctgaccacgctcaatcccgcccagttgttg
accgatgaggaatactacgaggcgatggaggagttcggcgacgaattcaccgcgaaaatg
ggtgctgaagcagttcaggatctgatgaagcagctcgacctggagcgcgaaatcagcaac
ctgcgcgaggagatcccggccaccaattcggagaccaagatcaagaagctgtccaagcgg
ttgaagttgatggaggccttcgccggctccggcaacaagcccgagtggatggtactcaat
gccctgccggtactgccgccggacctgcgcccgctggtgccgctggatggcggccgcttt
gcgacctccgacctcaacgacctgtaccgccgggtgatcaaccgcaacaaccgcctcaag
cggctgctggacctgaacgcaccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gagtctgtggacgcgctgctggataacggccgccgcggccgggccatcaccggttccaac
aagcggccactgaagtccctggccgacatgatcaagggcaagcaggggcggttccgccag
aacctgctgggcaagcgggtggactactccggccgctcggtgatcgtggtgggccccacc
ctgcgtctgcaccagtgcggactgcccaagaaaatggcgctggaactgttcaagcccttc
atttttggcaagctggaggcgcgcggtctggcgaccaccatcaaggcggccaagaaaatg
gtcgagcgcgagccgccggaagtatgggatatcctcgccgaagtgattcgcgagcacccg
gtgctgctgaaccgggcacccaccctgcaccgcctgggcatccaggccttcgagccggtg
ctgatcgaaggcaaggcgatccagctgcacccgctggtctgcgccgcctacaacgctgac
tttgacggtgaccagatggcggtccacgtgccgctgaccatcgaggcccagctggaagcg
cgggcgctgatgatgtccaccaacaacatcctgtcgccggccagcggtgatcccatcatc
gtgccgtcccaggacgtggtgctgggtctgtattacatgacccgctcccgggtcaacgcc
aagggcgagggcatgatctttgccaacgtttccgaggtcaaccgcgcctatcgcgggggt
cacgtacacctgcaggcacgggtcaaggtacgtatccatgaagtggttcaaaccgaagaa
ggtgaccgcatggagcgcaccttcatcgccgatacgacggtcggccgggcattgctgtgg
gagattgtccccgagggaatcggttatgagatggtcaaccaggatatggccaaaaaggcg
atttcccggatcatcaaccagtgctaccgcgttgtgggtctgaaggccacggtcattttt
gccgatcagttgatgtataccggctacgagtactccacccgttccggctcctccatcggt
gtgaacgactttgtgatccccgaagcgaaggccgagctcatcgcccgcgcggaccgggaa
gtgaaggagatcgaagaccagtatgcggccggtctggtcacccagggcgagaagtacaac
aaggttatcgatatctggtcacgcgccaatgatctggtgtccaaggcaatgatggatggc
ctgtccaaggagacggtgatcaaccgcgatggcgaggaagaagatcaggcctcgttcaac
tcggtgtatatctatgctgactccggcgcgcgcggttcacccgcccagatccgtcaactg
gcgggtatgcgcggtctgatggccaagccggacggctccatcatcgagacgccgatcacc
gccaacttccgcgagggtctgaacgtacttcagtattttatttccacgcacggggcccgc
aagggtctggcggacacggcactgaaaacggccaactccggttacctgacccggcgcctg
gtcgacgtggcccaggacctggtggtcaccgaagtggattgcggcaccgaccgcggcctg
ctgatgacaccggtcatcgacggcggcgatatcatcgagtcactgggtgaccgtgttctg
ggccggattgtggccaaggacgtgatcaagcctggcagcagtgaggaaattgcgatcact
gccggcaccatgctcgatgaattgtggatcaagcggcttgaggaaatgggcatcgacgaa
gtggaagtgcgctcgccgattacctgcgagacccgccacgggatctgctccacctgctac
gggcgtgacctggcgcgcgggcaccgggtcaacatgggcgaggccattggtgtggtcgcg
gcccagtccattggtgagccgggtacccagcttaccatgcgcaccttccacattggtggg
gcggcgtcgcggcagacggcccaggacaacatccaggtgatgaacgagggcagcgtgcgg
ctgcacaacgtgaagactgtagagcgcaaggacggcttcctgattgcagtatcccgttcc
ggcgagctgtccatcctcgacaagatgggtcgtgagcgcgagcgctacaaactgccctac
ggtgcgatcatcaaggtgcatgacaacgccgaggtatccgccggcgacatcgtcgccaac
tgggatccccacacccacccgatcattaccgaggtggcgggtatcgccaggttctcgggt
atggaggaggggattaccatcaagcgccagaccgacgagctgacgggtctgtccaacatt
gaggtgctggatctgggtgagcggccggcggcgggcaaggatgtgcgtccggcggtgtcc
ctggtggacagcaacggtgacgaactctgcctggctggcaccaatgtgccggctcactac
ttcctgccggcccacgccctggtggcgccggagaatggcgccaatctggaggcgggcgac
gttattgcgcggattccccaggaaggctccaagacccgggatatcaccggcggtctgccg
cgggtggcggacctgttcgaggctcgcaagcccaaggagcctgccatcctggcagagatc
tccggcactgtgagctttggcaaggaaaccaagggcaagcggcggctggtgatcacgccc
accgacagcacgacgctggcggatggctcggatcactacgaggcgttgattcccaagtgg
cgcaacatgtcggtgtttgagggcgagtttgtcgaaaaaggcgaggtggtctccgagggc
ccgctgagcccgcacgatatcctgcgcctcaaggacgtcaaggagctggcgaagtacatt
gtcaatgagatccaggaggtgtaccgcctccagggtgtgaagatcaatgacaagcacatc
gaagtcatcgtgcgccagatgttgcgcaaggtcgtcatcacttcgtccggggactccagt
ctgatcaagggcgagcaggtcgagcatgtgaccttcctggaagagaacgaacgcctgctg
gcggagggcatggtgcccgccactgccgagcgcgagttgctgggcatcaccaaggcatcg
ctggcgaccgagagctttatctcggcggcatcgttccaggagaccacccgcgtcctcacc
gaggctgctgtcaccggcaagcgggattatctgcgcggactcaaggaaaacgtcgttgtg
ggccgcctgattccggcgggcaccggcctggcctatcatgccgagcgcaagcgcacccgc
ggtggcgagacggaaatgagtgtttcggcccaggaaatcgaagcagcactgaccgaggca
ctgcaggacagcaacagctag
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