Kineobactrum salinum: G3T16_14370
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Entry
G3T16_14370 CDS
T06468
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kim
Kineobactrum salinum
Brite
KEGG Orthology (KO) [BR:
kim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kim03009
]
G3T16_14370
Enzymes [BR:
kim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G3T16_14370
Ribosome biogenesis [BR:
kim03009
]
Prokaryotic type
rRNA helicases
G3T16_14370
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIB66404
UniProt:
A0A6C0U9N7
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All DBs
Position
complement(3270681..3272018)
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AA seq
445 aa
AA seq
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MLEEFDLDRSLQLALAELAYTTATEVQQQLLPPALEGRDLRVSAPTGSGKTLAYLLPLLQ
RLLTEPLPPSAGILGLVLVPTRELARQVLKECRQLLAKSNLRADAVTGGADFKYQKSLLR
KNPEVLVATPGRLLEHCERRSTDLLGLRVLVLDEADRMLEMGFREDVLKIAGFCGSERQT
LMLSATLHSRGLGEISDSLQHEPVTISCGEIRAAHKDIFHQRILADNLAHKDALLLALLA
DSRGRKQLVFANKRSTAARLAGLLRHHGLRAGCLHGEMSTEERKQVVTLFSQGSVDIVTA
SDLAARGLDIEGIDTVINYDLPHSGDDYLHRTGRTGRAGAQGLAISLIGASDWNLMISIQ
RYLKLEMEPRSLPGLKARYAGPKKLKSSGKAAGQKKKSTDAGQVKKKERLRDKKARGRPR
RKSADAPANDGFAPLLKKQRLKPES
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgaagaattcgacctcgaccgaagcctgcaactggccctggcggagctggcctat
accactgccaccgaagtacaacagcaactgctgccaccagcgctggaagggcgcgacctg
cgggtcagcgcgcccaccggtagcggcaagacactggcctatctgctgccgctgttgcag
cgactgctgaccgagccgctccctcccagcgccggcatcctgggactggtactggtgccg
acccgggaactggcgcgccaggtactgaaggagtgccgccagttgctggccaaatcgaac
ttgcgcgccgatgccgtgaccggcggcgccgatttcaaataccagaagtccctgctgcgc
aagaatccggaagtgctggtggcgaccccgggccgtctgctggagcactgcgaacgccgc
agcacagatctgctgggcctgcgggtgctggtgctggatgaggcggaccggatgctggaa
atgggttttcgcgaggacgtgctgaaaatcgccggtttctgcggcagcgagcgtcagacc
ctgatgctgtcggccaccctgcacagccggggactaggtgaaatcagcgacagcctgcag
cacgagccggtcaccatcagctgcggcgagatccgcgctgcgcacaaggatatttttcac
cagcgcatcctcgccgataatctggcgcacaaggacgctctgctactggcactgctggcc
gacagcaggggccgcaaacaactggttttcgccaataagcgcagcacagcagcgcgactg
gccggcctgctgcgacaccacgggctgcgggccggctgcctgcacggcgagatgagtacc
gaggaacgcaagcaggtggtcacgctgttttcccaaggtagtgtggacatcgtcaccgcc
agcgacctggccgcgcgcgggctggacatcgagggtatcgacaccgtcatcaattacgac
ctgccgcacagcggtgatgactatcttcaccgcaccggccgcaccggacgcgccggcgcc
caggggctggcgatctcgttgattggcgccagtgactggaacctgatgatcagcatccag
cgctatctcaagctggaaatggagccgcgcagcctgcccggcctgaaggcgcgctacgcg
ggacccaagaaactgaaatcctcaggcaaggccgcgggacagaagaagaaaagcaccgat
gccggccaggtgaaaaagaaggagcggctgcgcgacaagaaagcccgcggccgcccccgt
cgcaagagcgccgacgcgcctgccaacgatggctttgccccactgctgaaaaagcagcgg
ctgaagccggagagctga
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