Kineobactrum salinum: G3T16_14795
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Entry
G3T16_14795 CDS
T06468
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kim
Kineobactrum salinum
Brite
KEGG Orthology (KO) [BR:
kim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kim03016
]
G3T16_14795 (thpR)
Enzymes [BR:
kim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
G3T16_14795 (thpR)
Transfer RNA biogenesis [BR:
kim03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
G3T16_14795 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
QIB66478
UniProt:
A0A6C0U3G3
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All DBs
Position
complement(3356961..3357488)
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AA seq
175 aa
AA seq
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MCVFFGLELDSDTKRAVADWRDRYGLAHGQPVPADNFHLTLAFVGEVDHRHLETLTQAVD
QWASGYTVGAGRLVLDQAGYWQKQRIYWLGPEQPQLELARLAVKLQNLAGPAGARRQRKL
FVPHVTLFRSCAEPPPAPVVAPRIDVHYQHFTLFETLQGRQGVSYRALQHWPLNR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtattttttggccttgaactggattcggataccaaacgggcagtcgccgactgg
cgggaccgctatggtctcgctcacggacagccagtgcctgccgacaatttccacctcacc
ctggcgtttgtcggcgaggtggaccatcgccacctggaaaccctgacacaggcagttgat
caatgggcatccgggtatactgtcggtgctggccgcctggtgctggatcaagccggatac
tggcagaaacagcggatctactggttgggaccggagcaaccacagctggaattggcccgc
ctggccgtgaaattgcagaatctcgctgggcccgctggcgcaagacggcagcggaaactg
tttgtaccgcacgtgacactgtttcgatcttgcgcagaaccaccgcccgccccggtggtg
gcgccccggatcgacgtgcactatcagcacttcaccctgttcgaaaccctgcaagggagg
cagggagtcagctatcgggcgctgcagcactggccgctgaaccgctag
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