Kineobactrum salinum: G3T16_17160
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Entry
G3T16_17160 CDS
T06468
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kim
Kineobactrum salinum
Pathway
kim03410
Base excision repair
kim03430
Mismatch repair
kim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3T16_17160 (recJ)
03430 Mismatch repair
G3T16_17160 (recJ)
03440 Homologous recombination
G3T16_17160 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kim03400
]
G3T16_17160 (recJ)
DNA repair and recombination proteins [BR:
kim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G3T16_17160 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G3T16_17160 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G3T16_17160 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
DUF5795
Motif
Other DBs
NCBI-ProteinID:
QIB67741
UniProt:
A0A6C0U6M7
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All DBs
Position
3857526..3859205
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AA seq
559 aa
AA seq
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MLAGGLHPLLARVYGGRGVTDPGELQLSFRDLLPPLQLSGCEQAARLLADALACQQRLLI
VGDFDADGATSTALAVTVLRACGARQVDYLVPNRFEYGYGLTPEIVELAAQRQPDLIITV
DNGISSIEGVAAARARGIATLVTDHHLAGSELPAADVIVNPNQPGCGFPSKCIAGVGVIF
YVMLALRAELRSRGWFEQAGLTEPQLADCLDLVALGTVADVVPLDRNNRILVAAGLQRIR
AGRARPGIRALLEIAGRNAATVVASDLGFAVGPRLNAAGRLEDMSIGIECLLAESGREAA
ERAARLQQLNLERRAIEQDMQQEALALLAGLELTADRAAITLYEPGWHQGVIGILASRIK
DRLHRPTIAFADADAEGQELKGSARSINGIHIRDVLDAVATRQPGLITRFGGHAMAAGLS
LPSDHYPAFAEAFVAEVARHGRDLDLEAVLESDGELQAPDFDLELATMLRFAGPWGQHFP
EPLFDGRFRIVQQRLVGTRHLKLVLALPGTDTVVDAIAFNVDTECWPDPGREWLEAAYRL
EVNEFRGNRSLQLMIEQLL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
ctgctggccgggggcctgcatccgttgctggcgcgggtctacggcggccgcggggtgacc
gaccccggcgagttgcagctgtcattccgggacctgctgcccccgctgcaactgagcggc
tgcgagcaggccgcgcgcctgctggcggatgcactggcctgccagcagcgactgctgatc
gtcggcgacttcgatgccgatggtgccaccagtactgcgctggcggtcactgtgctgcgg
gcctgcggcgcccggcaggtggattacctggtacccaaccgtttcgaatacggctacggc
ctgacccccgagatcgtcgaactggcagcgcagcgccagccggacctgatcatcaccgtg
gacaacggcatctccagtatcgagggggtagctgccgcccgcgcccgcggcatcgccact
ctggtgaccgaccaccacctggccggcagtgagctgccggcggcggatgtgatcgtgaat
cccaaccagcccggctgcggtttccccagcaaatgcatcgccggggtcggggtgatcttc
tacgtgatgctggcgctgcgggcggagctgcgcagccgcggctggttcgagcaggccgga
ttgacggagccgcagctggcggactgcctggacctggtcgcgctgggcacggtcgcggat
gtggtgccactggatcgcaacaaccgtatcctggtggcggccgggctgcagcggatacgt
gccggccgggcccggcccggcatccgcgcgctgctggaaattgcgggccgcaatgccgct
acggtggtggcatcggacctgggttttgcggtggggccacggttgaacgcggcggggcgg
ctggaggacatgtcgataggtatcgaatgcctgctggcggagtccgggcgcgaggctgcc
gagcgtgcggcgcggctgcagcagctgaacctggagcggcgcgcgatcgagcaggatatg
cagcaagaggcgctggcactgctcgccgggctggaactgacggctgaccgggcggcaatc
accctgtacgaacccggctggcaccagggtgtgatcggcatcctggcatcgcggatcaag
gatcgtctgcaccggccgaccatagcctttgccgatgcggacgcagagggccaggaattg
aaaggctcggcgcgctccatcaacggtattcatattcgcgatgtgctggatgcggtggcg
acccggcagcccggcctgatcacccgttttggcggtcacgcgatggcggcggggctgagt
ctgcccagcgaccactatccggcttttgccgaggcctttgtcgccgaggtggcccgccac
ggccgcgacctggacctggaggccgtgctggagtccgacggtgagctgcaggcgccggat
ttcgatctggaactcgccacgatgctgcgcttcgccgggccctggggccagcatttcccg
gaaccgctgttcgacggtcgcttccgaatcgtgcagcaacggctggtggggacccggcat
ttgaaactggtactggcgctaccgggcactgacacggtggtggatgcgattgccttcaat
gtcgataccgagtgctggcccgaccccgggcgggagtggctggaggcggcctaccggctg
gaggtcaacgaattccgcggcaatcgcagcctgcagctgatgatagaacagctgctgtag
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