Kineobactrum salinum: G3T16_19980
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Entry
G3T16_19980 CDS
T06468
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kim
Kineobactrum salinum
Brite
KEGG Orthology (KO) [BR:
kim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kim03016
]
G3T16_19980 (rnd)
Enzymes [BR:
kim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G3T16_19980 (rnd)
Transfer RNA biogenesis [BR:
kim03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G3T16_19980 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QIB67334
UniProt:
A0A6C0UBC0
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All DBs
Position
4477017..4478132
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AA seq
371 aa
AA seq
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MKWQLIESDAALAQLVQDNSGAEAVAVDTEFMRRNTFYPEVALVQLCFGPDAWLIDPLTL
TDLQPLRELLLNPSIIKVLHSASEDLEVFDHWLGTLPAPLFDTQRAAALVNRGFGMGYRA
LVLDICGVELPKGETRSDWLQRPLTASQCEYAAQDVAHLLPVWRHLQEACVAQGKLDWVL
ADGEDTLAAFRAPAANFAQRIKSAWKLDQRQLASLYAICDWRERVARQRNKPRGWIIDDQ
TCFELARLSPDSQAGLAAVEGLGAGVIRRDGETLLTLLREQRALPPESLPQRLPQPLDVN
GRKQLSRLKARARSLAQEHGVAPEVLLQGKDYELLLRQAAGEELPDQPSWSGWRRAAAVA
PLRRMLAGDQS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggcagttgatcgaatcggacgccgccctggcgcagcttgtgcaggacaactcc
ggcgccgaagcggtggccgtggacactgaattcatgcgccgcaataccttctatccggag
gtggcgctggtgcagttgtgtttcgggccggatgcctggttgatagaccccctgaccctg
accgatctccagccgctgcgcgagctgttgctaaatccctcgattatcaaggtgttgcac
tcggccagcgaggatctggaggtcttcgaccattggctggggacgctgcccgcaccgctg
tttgatacccagcgcgccgccgcgctggtcaatcgtggttttggcatgggctaccgcgcg
ctggtgctggatatctgcggggtggaactgcccaagggcgagacccgttcggactggctg
cagcgtccgctgaccgcctctcaatgtgaatacgcggcccaggacgtggcgcacctgttg
ccggtgtggcgtcatttgcaggaggcctgtgtggcccagggcaagctggactgggtgctg
gcggatggcgaggacacgctggcggcatttcgtgcccccgcggccaattttgcccagcgg
atcaagtccgcctggaagctggatcagcggcaactggcatcgctgtatgccatctgcgac
tggcgagaacgggttgcccgccagcgcaacaagccgcgcggctggattattgatgaccag
acctgcttcgaactggcgcggttaagccctgactcccaggccggcctggctgccgtggaa
ggtctgggtgccggcgtcatcaggcgcgatggcgagacactgctgaccctgctgcgggaa
cagcgggcgctgccacccgaatcgttgccgcagcgtctgccgcagccgctggacgtcaat
ggccgcaagcagttgagcagactcaaggcccgggccaggagcctggcgcaggagcatggg
gtcgcgccggaggtcctgttacagggcaaggactacgagctgttgctgcgtcaggctgca
ggggaggagttgccggaccagccctcctggtcgggctggcgtcgggcagccgcggtggct
cccctgcgccggatgctggccggagatcagtcttga
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