Phytobacter ursingii: AB182_17255
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Entry
AB182_17255 CDS
T03950
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kin
Phytobacter ursingii
Pathway
kin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB182_17255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kin03019
]
AB182_17255
Enzymes [BR:
kin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB182_17255
Messenger RNA biogenesis [BR:
kin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB182_17255
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AKL12946
UniProt:
A0AAC8QQ44
LinkDB
All DBs
Position
complement(2922242..2923594)
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AA seq
450 aa
AA seq
DB search
MSFDSLGLNPEILRAVDEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QRLVQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNLRSLVVFGGVSINPQMM
KLRSGVDILVATPGRLLDLEHQNAVKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDDIKSLAEKLLRNPLEIEVARRNTASEQVTQHVHMVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIALPGYEPDPSIKAEPIVNGRQSQGRGGRGQGGGGGRGQQQPRRNDGGAP
KAKAPRTQEGSKPAGEKPRRRRPRKPAASA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgtgctgtcgacgagcagggc
taccgtgagccaacccctattcagcagcaggcgatccctgcggtgctggaaggccgcgac
ctgatggcgagcgcccagactggtaccggcaaaaccgcgggctttacgctgccgctgcta
caacgtctggtgcaaaaagagccgcatgcgaaaggccgtcgtccggtgcgtgcgctgatc
ctgacgccaacgcgcgaacttgccgcgcaaatcggcgaaaacgtacgtgattacagtaaa
tatctgaacctgcgctcgctggtggttttcggcggcgtgagcattaacccgcagatgatg
aagctgcgtagcggtgtcgatattctcgtcgctacaccgggtcgtctgctggacctcgaa
caccagaatgccgtcaaactggacagcgttgagatcctggttctggacgaagccgaccgc
atgctggacatgggctttatccatgatattcgccgcgtattggctaaactgcctgcgcgt
cgtcagaatctgctgttttccgcgactttctcggacgacatcaaaagcctggccgaaaag
ctgctgcgtaacccgctggaaatcgaagtggcgcgccgtaacaccgcctccgagcaggtg
acgcaacatgttcatatggtcgacaagaaacgtaagcgcgagctgctctcccagatgatt
ggcgaaggcaactggcagcaggtgctggtcttcacccgcaccaaacacggtgcgaaccat
ctggctgaacaactgaacaaagacggtattcgcagcgcggctatccacggaaataaaagc
cagggcgcgcgtacccgtgcgctggcagactttaaatcgggcgatatccgcgtactggtc
gccactgacattgcggcccgtggtctggatatcgaagaactgccgcacgtcgtcaactac
gagctgccgaacgtgccggaagattatgtacaccgcattggccgtaccggtcgcgctgcg
gcaaccggtgaagcgctgtcgctggtgtgtgttgatgaacataaactgctgcgcgatatc
gaacgtttgctgaaaaaagagatcccgcgtattgccctgccgggttacgagcccgatcca
tctatcaaggccgagccgattgtgaatggtcgtcagagccagggtcgcggtggccgtggt
cagggcggtggcggtggtcgcggacaacagcagccacgccgtaacgacggtggcgcgccg
aaagcgaaagcacctcgtacgcaggaaggcagtaaaccggcgggtgaaaaaccgcgccgt
cgtcgcccgcgtaaacccgcagcgagcgcctga
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