Phytobacter ursingii: AB182_21010
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Entry
AB182_21010 CDS
T03950
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
kin
Phytobacter ursingii
Brite
KEGG Orthology (KO) [BR:
kin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kin03019
]
AB182_21010
Enzymes [BR:
kin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AB182_21010
Messenger RNA biogenesis [BR:
kin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AB182_21010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
DEAD
Helicase_C
AAA_22
AAA_19
HA2_N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKL13618
UniProt:
A0AAC8QRQ3
LinkDB
All DBs
Position
complement(3692944..3695373)
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AA seq
809 aa
AA seq
DB search
MSLLPVAAVLPDLLHALQRAPQVLLTAPTGAGKSTWLPLQLLQQGGIDGRILLLEPRRLA
ARNVAQRLAESLNEQPGDTVGYRMRAQTCVGPNTRLEVVTEGILTRMIQHDPELSGVGLV
ILDEFHERSLQADLALALLLDVQQGLRDDLKLLVMSATLDNSRLQTLLPDAPLIISEGRM
YPVERRYQALSTHQRVDEAVAVATADLLRSQSGSLLLFLPGVGEIQRVQEQLASRVAEDV
MLCPLYGALPLNEQRKAILPPPVGKRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDS
RTGLTRLVTQRVSQASMTQRAGRAGRLEPGICLHLTGKEQAERAAVQSEPEILQSDLSGL
FMELLQWGCQDPAQLNWLDLPPTTNLAAAKRLLTQLRALEGDRLSPFGKKMASLGNDPRL
AAMLASASNADEVATAAKLAAILEEPPRGGNTDLRSAFSRNQPQWQQRARQLIRRLKSAE
GEPDSDLLAPLLASAFADRIARRRGQDGRYQLANGMGAMLDADDALNRHEWVLAPLLLQG
SQSPDARILLALPLDIDRLMAACPHIVQPSDSVEWDEAQGTLKAFRRSRIGQLTVKVQPL
AKLPEEELHQAMLNGIRDKGLDVLNWTPEAKQLRLRLHCAAKWLPEEAWPAVDDASLLAS
LESWLLPQMRGVHSLRALKALDVGEALKAFLPWPLRQRLDSELPGHYTVPTGSRIAIRYH
EDNPPALAVRMQEMFGEATTPVIAQGRIALVLELLSPAQRPLQITRDLAAFWQGAYREVQ
KEMKGRYPKHVWPDDPANAAPTRRTKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtccttactgccggttgctgccgtattacccgaccttctccatgcgttacaacgcgcg
ccccaggtactgctgaccgccccaacaggtgcggggaagtcaacctggctgccgctgcaa
ttgttgcagcaaggcggcattgacggacgtattttactgcttgaaccgcgcagactggct
gcccgtaacgttgcgcaacggctggcggagtcgcttaatgagcagcccggcgacaccgtc
ggctaccgaatgagagctcaaacctgtgttgggccgaatacgcgtctggaagtggtgacg
gaggggatcctgacgcgaatgatccagcacgatcccgagctcagcggcgttggtctggtg
atccttgatgaatttcacgaacgtagcctgcaggccgatctggcgctggcgctgttgctg
gatgttcagcagggattgcgcgatgaccttaaactgctggtcatgtcagccacccttgat
aacagtcgcctgcagacgctacttccggatgcgccgctgattatttcagaggggcgtatg
tacccggtagaacggcgttatcaggcattaagcactcatcagcgcgttgacgaggcggtc
gcggtggcgactgccgatctgctgcgttcgcaatcggggtcgttgttactgtttttgccg
ggggtaggggaaatccagcgtgtacaggaacaactggccagtcgggtcgctgaggatgtg
atgctttgtccgctgtatggggcgctgccactcaatgaacaacgcaaagccattcttccc
ccgccagtcgggaaaagaaaagtcgtgctggccacgaatatcgctgagaccagcctgacc
atcgagggcattcgcctggttgtggacagcgctcaggagcgcgtggcccgtttcgattcg
cgaacagggctaacaaggcttgtcactcagcgcgtgagccaggcgtcgatgacgcagcgt
gccgggcgtgcggggcgtcttgaaccgggtatctgcctgcatctgactggcaaagaacag
gccgaaagggcggcggtgcagagcgagccggagattttacaaagcgatttgtctggcctt
tttatggagttgttacagtggggatgccaggatccggcgcaacttaactggctggattta
ccgccgacgactaatcttgccgcagcgaagcggttgttgacgcaactgcgggcgcttgaa
ggcgatcgcctgtcgccattcgggaaaaaaatggcatcgttaggtaacgatccgcgcctc
gctgcgatgttagcgagcgccagcaatgcggatgaagtggcaacggcggcgaaactggct
gccatccttgaagagccgcctcgcggtggaaacaccgatttgcgtagcgccttttcccgc
aatcagcctcagtggcagcagcgggcccgacaactgattcggcggttgaaaagtgcggaa
ggggagcccgatagcgacctgttggcaccgttgcttgccagcgcctttgccgaccgcatt
gcgcgcagacgtggccaggacgggcggtatcagttggcaaacggcatgggcgcaatgctg
gatgcggacgatgcgcttaatcgccatgaatgggtgcttgcgccgctattgttacaggga
agccagtcgccggatgcccgtattttgctggcgctgccgttggacattgatcggttaatg
gcggcctgtccgcatattgttcagccgtctgactctgtggaatgggatgaggcccaggga
accttaaaggcgtttcgtcgtagccggattggtcaactgacggtgaaagttcagccgctg
gcgaagcttccggaagaagaactgcatcaggcgatgctcaacgggatacgcgataaaggg
ctggatgtccttaactggacgccagaggcgaaacagttacgtctgcgtttacactgcgcg
gcgaaatggttgccggaagaggcatggcctgcggtagatgacgcttcgctgcttgcttct
ctggaaagctggttgttgccgcaaatgaggggcgtgcattcccttcgtgcgctgaaagcg
ctggatgtgggcgaagcattaaaagctttcttaccctggcctttgcgtcaacgtctggat
agtgaactgcctgggcattacactgtgccgacaggaagccggattgccattcgttatcat
gaagataatccgcctgctctggcggtgcgtatgcaggagatgtttggtgaggcgacgaca
cctgttatcgctcaggggcgcattgcgctggtgctggagctgctttcgccggctcagcgt
ccgctgcaaattacgcgcgatttagcggcgttctggcagggcgcataccgcgaagtgcaa
aaagagatgaaagggcgctacccgaaacatgtctggccagacgatccggcaaatgccgcg
ccgacgcggcgcactaaaaagtattcgtag
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