Phytobacter ursingii: AB182_24260
Help
Entry
AB182_24260 CDS
T03950
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kin
Phytobacter ursingii
Pathway
kin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB182_24260 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kin03021
]
AB182_24260 (rho)
03019 Messenger RNA biogenesis [BR:
kin03019
]
AB182_24260 (rho)
Transcription machinery [BR:
kin03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AB182_24260 (rho)
Messenger RNA biogenesis [BR:
kin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB182_24260 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AKL14200
UniProt:
A0AAC8QSN3
LinkDB
All DBs
Position
complement(4390694..4391953)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaacctggcccgtatgcgcaaacaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggcgacggtgtgctggagattctgcaggat
ggatttggtttcctccgctccgcagacagctcctacctcgccggtcctgatgacatctac
gtatcccccagccaaatccgtcgtttcaacctccgcactggtgacaccatttctggtaag
attcgtcctccaaaagagggtgaacgttactttgcattgttgaaagttaacgaggttaac
tacgacaagccggagaacgcgcgtaataagattctgttcgagaacttaacgccgctgcac
gcgaactctcgcctgcgcatggaacggggtaacggttctaccgaagatttaacggcacgt
gtcctggacctggcttcgccaattggtcgcggccagcgcggtctgattgttgcaccgccg
aaagccggtaaaacgatgctgctgcagaatattgcccagagcattgcctacaaccacccg
gattgcgtactgatggttctgctcatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagttgtcgcttccacttttgacgaaccggcatctcgtcacgtt
caggttgcggaaatggtgattgagaaggcgaaacgcctggttgagcacaagaaagacgtt
atcattctgcttgactccatcacccgtctggcgcgtgcctacaacaccgtggttcccgct
tccggtaaagtattgaccggtggtgtggatgccaacgccctgcatcgtccgaagcgtttc
ttcggtgctgcgcgtaacgtggaagagggcggtagcctgactattatcgcaacggcgctt
atcgataccggttccaaaatggacgaagttatctacgaagagtttaaaggcaccggtaac
atggagctgcatctctcccgtaagatcgctgaaaaacgcgtcttcccggctatcgattac
aaccgttccggtacccgtaaggaagagctgcttaccacgcaagaagagctacagaaaatg
tggatcctgcgtaaaatcatccatccgatgggtgaaatcgacgcaatggagttcctcatt
aataaactggcaatgacgaagacgaatgatgaattcttcgacatgatgaagcgctcttaa
DBGET
integrated database retrieval system
