Phytobacter ursingii: AB182_26050
Help
Entry
AB182_26050 CDS
T03950
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kin
Phytobacter ursingii
Pathway
kin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB182_26050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kin03400
]
AB182_26050
Enzymes [BR:
kin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AB182_26050
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB182_26050
DNA repair and recombination proteins [BR:
kin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB182_26050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AKL14521
UniProt:
A0AAC8QT37
LinkDB
All DBs
Position
4767056..4767865
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLAGAKILHAIVRNGRLRWPVSDEIHRLSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKAL
EGHNVLAHLGPEPLSETFNADYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSREECELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIIASKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacccgaggtagaaaccagccgccgcggcattgaaccgcatctggctggc
gccaaaattcttcatgccatcgtccgtaacgggcgccttcgctggcctgtctcggatgaa
attcatcgcctgagtgacaaaccggtcctcagcgtgcagcgccgtgccaaatacctgctg
ctggagttgccggacggctggataattatccatctggggatgtccggcagcctgcgtatc
ctcagcgaagagctcccggcggaaaagcacgatcacgtcgacctggtgatgagcaacggt
aaagtcctccgctacaccgatcctcgacggtttggggcctggctgtggacgaaagcgctg
gaaggccacaatgttctggcgcatctggggccggaaccgctaagcgagacgtttaacgcc
gattacctgcaacagaaatgcgcgaagaagaaaaccgccatcaaaccctggctgatggat
aacaagctggtagtgggggtgggcaatatctacgccagcgaatcgctgtttgccgccggg
atccatcctgaccgactggcctcgtcgctgtcacgtgaggagtgtgaactgctggtgcgg
gtgattaaagcggtactgctgcgctcgattgagcagggcggcaccacgctgaaagacttt
ctgcaaagcgatggcaaacccgggtattttgcgcaggaattgcaggtctatggacgtaaa
ggtgaaccgtgccgggtatgtggtacgccgattatcgcgtcgaagcatgcacagcgcgcg
accttttattgccgccagtgccagaagtaa
DBGET
integrated database retrieval system
