Phytobacter ursingii: AB182_28510
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Entry
AB182_28510 CDS
T03950
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kin
Phytobacter ursingii
Pathway
kin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB182_28510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kin03019
]
AB182_28510
03009 Ribosome biogenesis [BR:
kin03009
]
AB182_28510
Enzymes [BR:
kin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB182_28510
Messenger RNA biogenesis [BR:
kin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB182_28510
Ribosome biogenesis [BR:
kin03009
]
Prokaryotic type
rRNA helicases
AB182_28510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
DeaD_C
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKL14978
UniProt:
A0AAC8TQF8
LinkDB
All DBs
Position
5276834..5278753
Genome browser
AA seq
639 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAEIPDG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKMQPEEELDIET
LAAALLKMAQGERPLILPPDPVIERRPRREFRDRDERFERRGDRNDRAPRGDRNGEDRPR
RERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKGM
PGEVLQHFTRTRILNKPMNMQLLGDAQPRPERGGERRGNGERREGGRSFGGGERREGGRS
FGGERREGGRGEGRSFSGERRAPRRDREEGTSRRRFGDA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccaattcaggcagagtgcattccgcatctg
ctgggcggtcgcgacgttctgggtatggcccagacgggtagcggcaaaaccgcagcgttt
tcattaccgctgctgaacaatcttgatcctgagctgaaagcaccgcaaatcctggtgctg
gcgccgacccgcgaactggcggttcaggttgccgaagccatgacagatttctctaaacat
atgcgcggcgtgaacgtggttgccctttatggcggccagcgttatgacgtgcagttacgt
gccctgcgccaggggccgcagattgttgtcggtaccccgggtcgtctgcttgaccacctg
aaacgcggtacgctggacctctctaaactgagcggtctggtgctggacgaagccgatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcagagatcccggacggt
catcagaccgcgctgttctctgcaaccatgccggaagcgattcgccgcatcacccgccgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtgaccacgcgcccggatatc
agccagagctactggactgtgtacggcatgcgtaaaaacgaagcgctggtacgtttcctg
gaagcagaagattttgatgcggcgatcatcttcgttcgtaccaaaaacgcgaccctggaa
gtggcggaagcgctggagcgtagcggttataacagcgctgcgctgaacggcgacatgaac
caggcgctgcgtgagcagacgctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactat
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcaggt
cgtgctggtcgtgcgctgctgttcgttgagaaccgcgaacgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgaccattccggaagttgaactgccgaatgctgagttgctgggc
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgcgctctgctggctaaaatgcagccggaagaagagctggatatcgaaact
ctggccgcagcactgctgaaaatggcacagggcgagcgtccactgattctgccgccggat
ccggttattgaacgccgtccgcgtcgtgaattccgcgaccgtgatgagcgcttcgagcgc
cgtggcgaccgcaacgatcgtgctccgcgtggcgatcgtaacggtgaagatcgtccgcgt
cgtgaacgtcgtgatgcaggcgaaatggagctgtaccgtattgaagtgggccgtgatgat
ggcgttgaagtgcgtcatatcgttggcgcgatcgctaacgaaggcgacatcagcagccgt
tatatcggtaacatcaagctgttcggtacccactctaccattgagctgccgaaaggcatg
ccgggcgaagtactgcagcactttactcgcacccgcatcctgaacaagccgatgaacatg
caactgctgggtgatgcacagccgcgtcctgagcgtggtggtgagcgccgtggtaacggt
gagcgtcgtgaaggtggccgcagcttcggtggtggcgaacgtcgtgaaggtggtcgcagc
ttcggtggtgagcgtcgtgaaggcggtcgtggtgaaggccgtagcttcagtggtgagcgt
cgcgcgccgcgtcgtgaccgcgaagaaggcaccagccgtcgtcgtttcggtgacgcataa
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