Kitasatospora sp. NA04385: HUT16_08535
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Entry
HUT16_08535 CDS
T08635
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kis
Kitasatospora sp. NA04385
Pathway
kis03030
DNA replication
kis03430
Mismatch repair
kis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUT16_08535
03430 Mismatch repair
HUT16_08535
03440 Homologous recombination
HUT16_08535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kis03032
]
HUT16_08535
03400 DNA repair and recombination proteins [BR:
kis03400
]
HUT16_08535
Enzymes [BR:
kis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUT16_08535
DNA replication proteins [BR:
kis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUT16_08535
DNA repair and recombination proteins [BR:
kis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUT16_08535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QKW19102
LinkDB
All DBs
Position
complement(1964139..1964846)
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AA seq
235 aa
AA seq
DB search
MTWWKGPLTGFDLETTGTDPEESRIVTAAVVDTLGGGVQGATTWLLDPGVPIPAEAAAIH
GITDAEARAHGRPAAEAVEEIARALVERLAAGRPVVAFNAPFDLSLLDAELRRHGLPALA
DRLGGPVTPVVDAMVVDRALDKYRKGSRTLQRVCEVYGVELRDAHEAGSDALAAVRVAVA
LGHRYPAQAGDLPLEELHRRQVDWHRAWAADLQSWLRRKDPAAVVDPRWPLKAAS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgacctggtggaaggggccgctcaccggtttcgacctggagaccaccggcaccgacccg
gaggagtcacggatcgtcaccgccgccgtggtcgacaccctcggcggcggcgtccagggc
gccaccacctggctgctcgacccgggcgtgccgatacccgccgaggccgccgccatccac
ggcatcaccgacgccgaggcccgcgcgcacggccgcccggccgccgaggcggtcgaggag
atcgcccgcgccctggtcgagcggctcgccgccgggcggcccgtggtcgccttcaacgcc
ccgttcgacctctccctgctggacgccgaactgcgccggcacggcctgcccgcgctggcc
gaccggctcggcggcccggtcaccccggtggtcgacgcgatggtcgtcgaccgcgcgctg
gacaagtaccgcaagggctcgcgcaccctgcagcgggtctgcgaggtctacggcgtcgaa
ctgcgcgacgcgcacgaggccggcagcgacgcgctggccgccgtccgggtcgcggtcgcc
ctcggccaccggtacccggcgcaggccggcgacctgccgctggaggaactgcaccggcgg
caggtcgactggcaccgggcctgggccgccgacctgcagagctggctgcgccgcaaggac
ccggcggccgtggtcgacccgcgctggccgctcaaggccgcctcctag
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