Kitasatospora sp. MMS16-BH015: CFP65_4910
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Entry
CFP65_4910 CDS
T05366
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
kit
Kitasatospora sp. MMS16-BH015
Brite
KEGG Orthology (KO) [BR:
kit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kit03021
]
CFP65_4910
Transcription machinery [BR:
kit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFP65_4910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
HTH_Crp_2
PF0610-like_N
Sigma70_ECF
HTH_3
HTH_24
NirdL-like_HTH
IF2_N
MarR
GlnE
DUF8073_C
DUF7343
DinB_2
Zincin_1
Motif
Other DBs
NCBI-ProteinID:
AUG79628
LinkDB
All DBs
Position
complement(5720108..5721151)
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AA seq
347 aa
AA seq
DB search
MIAVSELNRTGATGLPVVTADLAVPPQARANAVHSAAAPDARTTADAVHPKDSHRMTQPT
DPTPEPQPAVTPDASAPEPAEEEAPVLPAQTPHRSGAPDREAARALFVRLAELPEGSPER
VELRNQLVRMHIPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDHERGVEFSTYAT
PTIVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATSELSQRHGRSPTVHELAEHLGISEE
DVLEGLESANAYSTLSLDVPDSDDESPAVADTLGATDEALEGVEYRESLKPLLAQLPPRE
QKILVLRFFRNMTQSQIATEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgccgtgagtgagctgaaccgcacaggtgccaccgggctgccggtggtcaccgcc
gacctggccgtaccgccccaggcgcgtgccaacgccgtccacagcgccgcggcgcccgac
gcccgaaccaccgcagatgccgtgcacccgaaggacagccatcggatgacccagccgacc
gatccgacgccggagccgcagcccgccgtcaccccagacgcgagcgccccggagccggcc
gaggaggaggcgcccgtgctgcccgcccagacgccccaccgctccggtgcgccggaccgg
gaggcggcccgggcgctgttcgtccggctcgcggagctgcccgaggggtcgcccgagcgg
gtcgagctgcgcaaccagctggtccggatgcacatcccgctggtcgagcacctggcccgg
cgcttccgcaaccgcggcgagccgctggacgacctcacccaggtcgccaccatcgggctg
atcaagtcggtggaccgcttcgaccacgagcgcggggtggagttctccacctacgcgacc
ccgaccatcgtcggcgagatcaagcggcacttccgcgacaagggctgggcggtccgggtg
ccgcgccggctccaggagctgcggctgtcgctcaccacggcgaccagtgagctctcccag
cggcacggccgctcccccacggtgcacgagctggccgagcacctgggcatctccgaggag
gacgtgctggagggcctggagtcggccaacgcctactccaccctctccctggacgtgccg
gacagcgacgacgaatcgcccgccgtggcggacaccctgggcgccaccgacgaggccctg
gagggcgtcgagtaccgcgagtcgctcaagccgctgctcgcccaactcccgccccgggag
cagaagatcctcgtcctgcggttcttccggaacatgacccagtcgcagatcgccaccgag
gtcggcatctcccagatgcacgtgtccaggctgctggcccggaccctcgcgcagctgcgc
gagaagctcttggtcgaagagtaa
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