Kitasatospora sp. MMS16-BH015: CFP65_5169
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Entry
CFP65_5169 CDS
T05366
Name
(GenBank) RNA polymerase sigma70
KO
K02405
RNA polymerase sigma factor FliA
Organism
kit
Kitasatospora sp. MMS16-BH015
Pathway
kit02020
Two-component system
kit02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CFP65_5169
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CFP65_5169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kit03021
]
CFP65_5169
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
kit02035
]
CFP65_5169
Transcription machinery [BR:
kit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFP65_5169
Bacterial motility proteins [BR:
kit02035
]
Flagellar system
Flagellar assembly proteins
Stator
CFP65_5169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
ASFV_J13L
UPF0122
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
AUG79879
LinkDB
All DBs
Position
6036285..6037346
Genome browser
AA seq
353 aa
AA seq
DB search
MQEGSRIEEAQVRGGLAGVAAVGGGGAGAPATDSEMVAPGPGARRVVGRPAVDRGKAERG
KAERPTGGRPARGRATGSRAASAEGAASAGEAEQGAQAVTDRTALDALWRSYKESGDARL
REQLILHYSPLVKYVAGRVGVGLPANVEQADFVSSGIFGLIDAIEKFDIDRAIKFETYAI
SRIRGAIIDELRALDWIPRSVRQKAKAVERTYATLEARLRRTPHEPEVAAEMGIAIEDLH
AIFSQLSLANVVALDELLHSAGEGGDRLSLMDTLEDIAADNPVEIAEDRELRRLLATAVN
TLPEREKMVVTLYYYEGLTLAEIGQVLGVTESRVSQIHTKSVLQLRAKLSDIR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggaggggtcccggatcgaggaggcgcaggtcaggggtgggctggccggtgttgcg
gcggtcggcggcggtggggccggggcgccggcgacggatagtgagatggtcgcgcccggg
ccgggcgcccggcgagtggtgggccggccggcggttgaccggggcaaggctgagcggggc
aaggctgagcgcccgacaggtggtcgcccggcgcgggggcgggcgaccggcagccgggca
gcctcggccgagggggccgcgagcgccggtgaggcggagcaaggggcgcaggcggtcacc
gaccggacggctctcgacgcactgtggcgctcgtacaaggagagcggggatgctcggctg
cgggaacagctgatcctgcactactcgccgctggtgaagtacgtcgccggccgggtcggg
gtcgggctgcccgccaacgtcgagcaggcggacttcgtctcgtccgggatcttcgggctg
atcgacgcgatcgagaagttcgacatcgaccgggcgatcaagttcgagacctacgcgatc
agccgcatccgtggcgcgatcatcgacgagctgcgcgccctcgactggatcccgcgctcg
gtccggcagaaggccaaggccgtcgagcgcacctacgccactctggaggcgcggctgcgc
cgcaccccgcacgagcccgaggtcgcggccgagatgggcatcgcgatcgaggatctgcac
gccatcttcagtcagctctcgctcgcgaacgtggtggcgctcgacgagctgttgcactcg
gccggcgagggtggtgaccggctgagcctgatggacaccctggaggacatcgccgccgac
aacccggtggagatcgccgaggaccgggagctgcggcggctgttggccacggcggtcaac
acgctccccgaacgggagaagatggtggtgacgctctattactacgagggcctgacgctc
gcggagatcggtcaggtgctcggtgtcaccgagagcagggtcagccagatccacaccaag
tccgtcctccagctgcgggcgaagctgtccgacatccgctga
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