Kitasatospora sp. MMS16-BH015: CFP65_5251
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Entry
CFP65_5251 CDS
T05366
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kit
Kitasatospora sp. MMS16-BH015
Pathway
kit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFP65_5251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kit03019
]
CFP65_5251
03400 DNA repair and recombination proteins [BR:
kit03400
]
CFP65_5251
Enzymes [BR:
kit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFP65_5251
Messenger RNA biogenesis [BR:
kit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFP65_5251
DNA repair and recombination proteins [BR:
kit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFP65_5251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AUG79960
UniProt:
A0A2H5B6H1
LinkDB
All DBs
Position
complement(6147312..6149630)
Genome browser
AA seq
772 aa
AA seq
DB search
MQKPTDAHAEGQLPGQAAPQSPDRPAVRARAEAVLRELAGPSAVLREDQWLAIEALVIDH
RRALVVQRTGWGKSAVYFIATALLRARGAGPTVIVSPLLALMRNQVDSAAKAGIHARTIN
SANPEEWETIQAEVAAGQVDILLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDW
GHDFRPDYRRLRTMLADLAPGVPVLATTATANARVTADVAEQLGTGGAPLGGLGAPVGAP
DHEDGGDGGDGGDRGAGEGRDRALVLRGPLDRESLSLGVLALPDPAQRLAWLADHLPELP
GSGIIYTLTVAAADEVTAFLRDRGYPVASYSGRTEDAERRSAEADLLANRVKALVATSAL
GMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVERAEVLLLPGREDEAIWRYFASLAF
PPEEQVRRTIDALAEADRPLSTAALETRVDLRRARLETMLKVLDVDGAVRRVRGGWTATG
TPWAYDTARYAKVAASREAEQSAMREYVATTGCRMEYLRRQLDDEEARPCGRCDNCAGAR
YRAEFSEEALGAARAALGRPGVPFEPRRLWPTGMEALGVPLKGRIPAGEQAETGRALGRL
SDIGWGTKLRTLLADQAPDGPVPAELVDALVSVLADWARGPGGWAGAEGPDGTRLARPVG
VVAMASATRPALVGSLSAQLAKIGRLPLLGQIAYTTGRPPHGPRSNSAQRLHSLAGTLTL
PEELHAALAANPGPVLLVDDQVDSGWTVTVAARLLRQAGASAVLPLVLAVQA
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagccgaccgacgcccacgccgagggccagctccccggccaggccgccccgcag
tcccccgaccgccccgccgtccgcgcgcgggccgaggcggtgctgcgggagctggccggg
ccgtccgccgtgctgcgcgaggaccagtggctggcgatcgaggccctggtgatcgaccac
cggcgcgcactcgtcgtccagcgcaccggctggggcaagtcggccgtctacttcatcgcc
accgccctgctgcgggcccggggcgccgggccgacggtgatcgtctcccccctgctcgcc
ctgatgcgcaaccaggtcgactccgccgccaaggccggcatccacgcccgcaccatcaac
tccgccaacccggaggagtgggagaccatccaggccgaggtggccgccggccaggtcgac
atcctcctggtcagccccgagcggctcaacaaccccgacttccgcgaccaggtgctgccc
aagctggccgccgccaccggcctgctcgtggtcgacgaggcccactgcatctccgactgg
ggccacgacttccgccccgactaccggcggctgcgcaccatgctcgccgacctggccccg
ggcgtgcccgtgctcgccaccaccgcgacggccaacgcccgcgtcaccgccgatgtcgcc
gagcagctcggcaccggcggcgcacccctcggcggtctcggcgcacccgtcggcgcgccc
gaccacgaagacggcggagacggcggagacggcggagaccgcggagccggcgagggccgg
gaccgggccctggtgctgcgcggcccgctcgaccgcgagagcctcagcctgggcgtgctc
gccctgcccgatcccgcgcagcgcctggcctggctggccgaccacctgcccgagctgccc
ggctccggcatcatctacacgctgaccgtggcggcggccgacgaggtcaccgccttcctg
cgcgaccgcggctacccggtcgcctcgtactcggggcgcacggaggacgccgagcgccgc
agcgccgaggccgacctgctggccaaccgggtcaaggccctggtcgccacctcggcgctc
gggatgggcttcgacaagcccgacctcgggttcgtggtgcacctcggctcccccagctcc
ccgatcgcctactaccagcaggtcggccgcgcgggccgcggcgtcgagcgcgccgaggtg
ctgctgctgccgggccgcgaggacgaggcgatctggcggtacttcgcctcgctcgccttc
ccgcccgaggagcaggtgcggcggacgatcgacgccctcgccgaggccgaccggccgctc
tccacggcggcgctggagacccgggtcgacctccgccgggcccggctggagacgatgctc
aaggtgctcgacgtggacggcgccgtccgccgggtgcggggcggctggacggccaccggc
acgccctgggcgtacgacaccgcgcgctacgccaaggtcgccgcctcgcgcgaggccgag
cagagcgcgatgcgcgagtacgtggccaccacgggctgccggatggagtacctgcggcgc
cagctggacgacgaggaggcccggccctgcggccggtgcgacaactgcgcgggcgcccgg
taccgggcggagttctcggaggaggccctgggggccgcccgggccgcgctcggccggccc
ggcgtcccgttcgagccgcgccggctctggccgaccggcatggaggcgctcggcgtcccg
ctgaagggccggatcccggccggggagcaggccgagaccggccgggcactgggccggctc
tccgacatcggctggggcaccaagctgcgcaccctgctggccgaccaggcgcccgacgga
cccgtcccggccgagctggtcgacgccctggtgagcgtgctggccgactgggcgcgcggg
ccgggcggctgggccggggcggagggccccgacggcacccggctggcccggccggtgggc
gtggtcgcgatggcctccgccacccgtccggccctggtcggcagcctgagcgcccagctg
gcgaagatcggccgcctgccgctgctcgggcagatcgcctacaccaccggccgccccccg
cacggcccccggagcaacagcgcccagcgcctgcactcgctggccggcaccctcaccctc
ccggaggagctgcacgccgccctcgccgccaaccccggtccggtcctcctggtcgacgac
caggtcgactccggctggacggtcacggtcgcggcccggctgctccgccaggcgggcgcg
agtgcggtgctgccgctggtcctggcggtccaggcctag
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